Evidence map›Paper›PMID 33523856›Full record

ArticleScience advances2021

Capsid opening enables genome release of iflaviruses.

Karel Škubník, Lukáš Sukeník, David Buchta, Tibor Füzik, Michaela Procházková, Jana Moravcová, Lenka Šmerdová, Antonín Přidal, Robert Vácha, Pavel Plevka

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Particles of echovirus 18 open to release their genomes in vivo.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  7. Understanding Virus Structure and Dynamics through Molecular Simulations.Journal of chemical theory and computation · 2023
    Review
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  16. ICAM-1 induced rearrangements of capsid and genome prime rhinovirus 14 for activation and uncoating.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Karel ŠkubníkCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 625 00 Brno, Czech Republic.ORCID 0000-0002-3216-4945
Lukáš SukeníkCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 625 00 Brno, Czech Republic.ORCID 0000-0002-7153-9017
David BuchtaCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 625 00 Brno, Czech Republic.ORCID 0000-0001-6787-6355
Tibor FüzikCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 625 00 Brno, Czech Republic.ORCID 0000-0002-1190-0210
Michaela ProcházkováCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 625 00 Brno, Czech Republic.ORCID 0000-0002-4229-9202
Jana MoravcováCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 625 00 Brno, Czech Republic.
Lenka ŠmerdováCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 625 00 Brno, Czech Republic.ORCID 0000-0001-8043-0921
Antonín PřidalDepartment of Zoology, Fishery, Hydrobiology, and Apidology, Faculty of Agronomy, Mendel University in Brno, Zemědělská 1/1665, 613 00 Brno, Czech Republic.ORCID 0000-0002-5798-6785
Robert VáchaCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 625 00 Brno, Czech Republic.ORCID 0000-0001-7610-658X
Pavel PlevkaCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 625 00 Brno, Czech Republic. pavel.plevka@ceitec.muni.cz.ORCID 0000-0003-4215-3315
Central European Institute of Technology · CZMendel University in Brno · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The family Iflaviridae includes economically important viruses of the western honeybee such as deformed wing virus, slow bee paralysis virus, and sacbrood virus. Iflaviruses have nonenveloped virions and capsids organized with icosahedral symmetry. The genome release of iflaviruses can be induced in vitro by exposure to acidic pH, implying that they enter cells by endocytosis. Genome release intermediates of iflaviruses have not been structurally characterized. Here, we show that conformational changes and expansion of iflavirus RNA genomes, which are induced by acidic pH, trigger the opening of iflavirus particles. Capsids of slow bee paralysis virus and sacbrood virus crack into pieces. In contrast, capsids of deformed wing virus are more flexible and open like flowers to release their genomes. The large openings in iflavirus particles enable the fast exit of genomes from capsids, which decreases the probability of genome degradation by the RNases present in endosomes.

Identifiers

PMID33523856
PMCPMC7775750
OpenAlexW3115043239

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.