Evidence map›Paper›PMID 33522486›Full record

ArticleeLife2021

Surprising phenotypic diversity of cancer-associated mutations of Gly 34 in the histone H3 tail.

Brandon R Lowe, Rajesh K Yadav, Ryan A Henry, Patrick Schreiner, Atsushi Matsuda, Alfonso G Fernandez, David Finkelstein, Margaret Campbell, Satish Kallappagoudar, Carolyn M Jablonowski and 3 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

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  18. Diagnostic value ofJournal of bone oncology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Brandon R LoweDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, United States.
Rajesh K YadavDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, United States.
Ryan A HenryDepartment of Cancer Biology, Fox Chase Cancer Center, Philadelphia, United States.
Patrick SchreinerDepartment of Bioinformatics, St. Jude Children's Research Hospital, Memphis, United States.ORCID 0000-0001-5391-2642
Atsushi MatsudaAdvanced ICT Research Institute Kobe, National Institute of Information and Communications Technology, Kobe, Japan.ORCID 0000-0003-0510-213X
Alfonso G FernandezDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, United States.
David FinkelsteinDepartment of Bioinformatics, St. Jude Children's Research Hospital, Memphis, United States.
Margaret CampbellDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, United States.
Satish KallappagoudarDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, United States.
Carolyn M JablonowskiDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, United States.
Andrew J AndrewsDepartment of Cancer Biology, Fox Chase Cancer Center, Philadelphia, United States.
Yasushi HiraokaAdvanced ICT Research Institute Kobe, National Institute of Information and Communications Technology, Kobe, Japan.ORCID 0000-0001-9407-8228
Janet F PartridgeDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, United States.ORCID 0000-0003-1102-6305
St. Jude Children's Research Hospital · USFox Chase Cancer Center · USNational Institute of Information and Communications Technology · JP

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
The Role of Histone Chaperones in Histone Acetylation and Nucleosome DynamicsR01GM102503 · NIGMS · UNIVERSITY OF NORTH CAROLINA WILMINGTON · PI ANDREWS, ANDREW JOSEPH · 2014 to 2023
$3.9M
NCI NIH HHS Cancer Center support grant (NCI CCSG 2 P30 CA21765)NCI NIH HHS P30 CA021765NIGMS NIH HHS R01 GM102503
6 · The paper itself

Abstract

Sequencing of cancer genomes has identified recurrent somatic mutations in histones, termed oncohistones, which are frequently poorly understood. Previously we showed that fission yeast expressing only the H3.3G34R mutant identified in aggressive pediatric glioma had reduced H3K36 trimethylation and acetylation, increased genomic instability and replicative stress, and defective homology-dependent DNA damage repair. Here we show that surprisingly distinct phenotypes result from G34V (also in glioma) and G34W (giant cell tumors of bone) mutations, differentially affecting H3K36 modifications, subtelomeric silencing, genomic stability; sensitivity to irradiation, alkylating agents, and hydroxyurea; and influencing DNA repair. In cancer, only 1 of 30 alleles encoding H3 is mutated. Whilst co-expression of wild-type H3 rescues most G34 mutant phenotypes, G34R causes dominant hydroxyurea sensitivity, homologous recombination defects, and dominant subtelomeric silencing. Together, these studies demonstrate the complexity associated with different substitutions at even a single residue in H3 and highlight the utility of genetically tractable systems for their analysis.

Indexed as

Homologous RecombinationDNA RepairDNA ReplicationGenomic InstabilityHistonesMutant ProteinsSchizosaccharomycesHistonesMutant Proteinscancerchromatinchromosomesgene expressionhistone mutationS. pombe

Identifiers

PMID33522486
PMCPMC7872514
OpenAlexW3126414462

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.