Evidence map›Paper›PMID 33522389›Full record

ArticlePhysiological genomics2021

Integration of metabolomics and transcriptomics reveals convergent pathways driving radiation-induced salivary gland dysfunction.

Lauren Meeks, Diogo De Oliveira Pessoa, Jessica A Martinez, Kirsten H Limesand, Megha Padi

Open access · greenAbstract read
In one paragraph

Article in Physiological genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Lauren MeeksDepartment of Nutritional Sciences, University of Arizona, Tucson, Arizona.ORCID 0000-0003-4153-5506
Diogo De Oliveira PessoaBioinformatics Shared Resource, Arizona Cancer Center, University of Arizona, Tucson, Arizona.
Jessica A MartinezDepartment of Nutritional Sciences, University of Arizona, Tucson, Arizona.
Kirsten H LimesandDepartment of Nutritional Sciences, University of Arizona, Tucson, Arizona.
Megha PadiBioinformatics Shared Resource, Arizona Cancer Center, University of Arizona, Tucson, Arizona.
University of Arizona · US

Funding

VITAMIN AP30CA023074 · NCI · UNIVERSITY OF ARIZONA · PI Teri L Bankhead · 1985 to 2026
$110.2M
Functional restoration through salivary progenitor label retaining cellsR01DE023534 · NIDCR · UNIVERSITY OF ARIZONA · PI ANN, DAVID K., LIMESAND, KIRSTEN H · 2014 to 2018
$1.9M
Ineffective wound healing responses enable chronic radiation-induced salivary gland dysfunctionR01DE029166 · NIDCR · UNIVERSITY OF ARIZONA · PI LIMESAND, KIRSTEN H · 2019 to 2023
$1.7M
Metabolic dysregulation during radiation-induced salivary gland dysfunctionR21DE029506 · NIDCR · UNIVERSITY OF ARIZONA · PI LIMESAND, KIRSTEN H · 2020 to 2021
$422k
NIDCR NIH HHS DE023534NIDCR NIH HHS DE029166NIDCR NIH HHS R01 DE023534NIDCR NIH HHS R01 DE029166NIDCR NIH HHS R21 DE029506
6 · The paper itself

Abstract

Radiation therapy for head and neck cancer causes damage to the surrounding salivary glands, resulting in salivary gland hypofunction and xerostomia. Current treatments do not provide lasting restoration of salivary gland function following radiation; therefore, a new mechanistic understanding of the radiation-induced damage response is necessary for identifying therapeutic targets. The purpose of the present study was to investigate the metabolic phenotype of radiation-induced damage in parotid salivary glands by integrating transcriptomic and metabolomic data. Integrated data were then analyzed to identify significant gene-metabolite interactions. Mice received a single 5 Gy dose of targeted head and neck radiation. Parotid tissue samples were collected 5 days following treatment for RNA sequencing and metabolomics analysis. Altered metabolites and transcripts significantly converged on a specific region in the metabolic reaction network. Both integrative pathway enrichment using rank-based statistics and network analysis highlighted significantly coordinated changes in glutathione metabolism, energy metabolism (TCA cycle and thermogenesis), peroxisomal lipid metabolism, and bile acid production with radiation. Integrated changes observed in energy metabolism suggest that radiation induces a mitochondrial dysfunction phenotype. These findings validated previous pathways involved in the radiation-damage response, such as altered energy metabolism, and identified robust signatures in salivary glands, such as reduced glutathione metabolism, that may be driving salivary gland dysfunction.

Indexed as

AnimalsGene Expression ProfilingGene Regulatory NetworksHead and Neck NeoplasmsHumansMetabolomicsMiceProtein Interaction MapsRadiation Injuries, ExperimentalSalivary GlandsSignal TransductionXerostomiametabolomicssalivary glandstranscriptomicsxerostomiaγ-radiation

Identifiers

PMID33522389
PMCPMC7988743
OpenAlexW3126517272

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.