Evidence map›Paper›PMID 33521880›Full record

ArticlePlant molecular biology2021

Transcriptional profiling reveals conserved and species-specific plant defense responses during the interaction of Physcomitrium patens with Botrytis cinerea.

Guillermo Reboledo, Astri D Agorio, Lucía Vignale, Ramón Alberto Batista-García, Inés Ponce De León

Abstract read
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In one paragraph

Article in Plant molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
8.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 42 citations in OpenAlex.

  1. The Importance of thePlants (Basel, Switzerland) · 2026
    Review
  2. Identification of Potentially Coding Small ORFs in Plant Transcriptomes.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  3. Article
  4. Algal origins of core land plant stress response subnetworks.The Plant journal : for cell and molecular biology · 2025
    Article
  5. Current and future perspectives for enhancing our understanding of the evolution of plant metabolism.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Article
  6. The evolution of plant responses underlying specialized metabolism in host-pathogen interactions.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  7. Biotic interactions, evolutionary forces and the pan-plant specialized metabolism.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  8. Review
  9. Review
  10. Review
  11. Article
  12. RALF peptides modulate immune response in the mossFrontiers in plant science · 2023
    Article
  13. Review
  14. Article
  15. Article
  16. International journal of molecular sciences · 2021
    Article
  17. Molecular biology of mosses.Plant molecular biology · 2021
    Article
  18. Journal of fungi (Basel, Switzerland) · 2021
    Article
  19. Journal of fungi (Basel, Switzerland) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Guillermo ReboledoDepartamento de Biología Molecular, Instituto de Investigaciones Biológicas Clemente Estable, Montevideo, Uruguay.ORCID http://orcid.org/0000-0003-3904-5217
Astri D AgorioDepartamento de Biología Molecular, Instituto de Investigaciones Biológicas Clemente Estable, Montevideo, Uruguay.ORCID http://orcid.org/0000-0001-9603-7710
Lucía VignaleDepartamento de Biología Molecular, Instituto de Investigaciones Biológicas Clemente Estable, Montevideo, Uruguay.ORCID http://orcid.org/0000-0002-4607-8423
Ramón Alberto Batista-GarcíaCentro de Investigación en Dinámica Celular, Universidad Autónoma del Estado de Morelos, Cuernavaca, México.ORCID http://orcid.org/0000-0002-1032-0767
Inés Ponce De LeónDepartamento de Biología Molecular, Instituto de Investigaciones Biológicas Clemente Estable, Montevideo, Uruguay. iponce@iibce.edu.uy.ORCID http://orcid.org/0000-0001-6495-4055
Instituto de Investigaciones Biológicas Clemente Estable · UYUniversidad Autónoma del Estado de Morelos · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageEvolutionary conserved defense mechanisms present in extant bryophytes and angiosperms, as well as moss-specific defenses are part of the immune response of Physcomitrium patens. Bryophytes and tracheophytes are descendants of early land plants that evolved adaptation mechanisms to cope with different kinds of terrestrial stresses, including drought, variations in temperature and UV radiation, as well as defense mechanisms against microorganisms present in the air and soil. Although great advances have been made on pathogen perception and subsequent defense activation in angiosperms, limited information is available in bryophytes. In this study, a transcriptomic approach uncovered the molecular mechanisms underlying the defense response of the bryophyte Physcomitrium patens (previously Physcomitrella patens) against the important plant pathogen Botrytis cinerea. A total of 3.072 differentially expressed genes were significantly affected during B. cinerea infection, including genes encoding proteins with known functions in angiosperm immunity and involved in pathogen perception, signaling, transcription, hormonal signaling, metabolic pathways such as shikimate and phenylpropanoid, and proteins with diverse role in defense against biotic stress. Similarly as in other plants, B. cinerea infection leads to downregulation of genes involved in photosynthesis and cell cycle progression. These results highlight the existence of evolutionary conserved defense responses to pathogens throughout the green plant lineage, suggesting that they were probably present in the common ancestors of land plants. Moreover, several genes acquired by horizontal transfer from prokaryotes and fungi, and a high number of P. patens-specific orphan genes were differentially expressed during B. cinerea infection, suggesting that they are important players in the moss immune response.

Indexed as

Gene Expression Regulation, PlantBotrytisBryopsidaDisease ResistanceGene Expression ProfilingGene OntologyHost-Pathogen InteractionsMetabolic Networks and PathwaysPlant DiseasesPlant ProteinsPlantsReverse Transcriptase Polymerase Chain ReactionRNA-SeqSpecies SpecificityPlant ProteinsBotrytis cinereaDefense genesOrphan genesPhyscomitrium patensTranscriptome

Identifiers

PMID33521880
OpenAlexW3127589763

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.