Evidence map›Paper›PMID 33515065›Full record

ArticleParasitology research2021

Giardia intestinalis coiled-coil cytolinker protein 259 interacts with actin and tubulin.

Omar Rojas-Gutiérrez, Armando Pérez-Rangel, Araceli Castillo-Romero, José Tapia-Ramírez, Emmanuel Ríos-Castro, Minerva Camacho-Nuez, Silvia Giono-Cerezo, Benjamín Nogueda-Torres, Gloria León-Avila, José Manuel Hernández

Abstract read
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In one paragraph

Article in Parasitology research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Omar Rojas-GutiérrezDepartamento de Zoología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Carpio y Plan de Ayala S/N, C.P. 11340, Ciudad de México, Mexico.
Armando Pérez-RangelDepartamento de Biología Celular, CINVESTAV, IPN, Av. IPN 2508, C.P. 07300, Ciudad de México, Mexico.
Araceli Castillo-RomeroDepartamento de Microbiología y Patología, Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara, Jalisco, Mexico.
José Tapia-RamírezDepartamento de Genética y Biología Molecular, CINVESTAV, IPN, Av. IPN 2508, C.P. 07300, Ciudad de México, Mexico.
Emmanuel Ríos-CastroUnidad de Genómica, Proteómica y Metabolómica, LaNSE, CINVESTAV-IPN, Av. IPN 2508, C.P. 07300, Ciudad de México, Mexico.
Minerva Camacho-NuezPosgrado en Ciencias Genómicas, Universidad Autónoma de la Ciudad de México, San Lorenzo 290, C.P. 03100, Ciudad de México, Mexico.
Silvia Giono-CerezoDepartamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Carpio y Plan de Ayala S/N, C.P. 11340, Ciudad de México, Mexico.
Benjamín Nogueda-TorresDepartamento de Parasitología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Carpio y Plan de Ayala S/N, C.P. 11340, Ciudad de México, Mexico.
Gloria León-AvilaDepartamento de Zoología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Carpio y Plan de Ayala S/N, C.P. 11340, Ciudad de México, Mexico. leonavila60@yahoo.com.mx.ORCID http://orcid.org/0000-0002-3292-6137
José Manuel HernándezDepartamento de Biología Celular, CINVESTAV, IPN, Av. IPN 2508, C.P. 07300, Ciudad de México, Mexico. manolo@cell.cinvestav.mx.
Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional · MXInstituto Politécnico Nacional · MXUniversidad Autónoma de la Ciudad de México · MXUniversidad de Guadalajara · MX

Funding

CONACyT 180016SIP-IPN 20200344
6 · The paper itself

Abstract

Giardia intestinalis is a human parasite that causes a diarrheal disease in developing countries. G. intestinalis has a cytoskeleton (CSK) composed of microtubules and microfilaments, and the Giardia genome does not code for the canonical CSK-binding proteins described in other eukaryotic cells. To identify candidate actin and tubulin cross-linking proteins, we performed a BLAST analysis of the Giardia genome using a spectraplakins consensus sequence as a query. Based on the highest BLAST score, we selected a 259-kDa sequence designated as a cytoskeleton linker protein (CLP259). The sequence was cloned in three fragments and characterized by immunoprecipitation, confocal microscopy, and mass spectrometry (MS). CLP259 was located in the cytoplasm in the form of clusters of thick rods and colocalized with actin at numerous sites and with tubulin in the median body. Immunoprecipitation followed by mass spectrometry revealed that CLP259 interacts with structural proteins such as giardins, SALP-1, axonemal, and eight coiled-coils. The vesicular traffic proteins detected were Mu adaptin, Vacuolar ATP synthase subunit B, Bip, Sec61 alpha, NSF, AP complex subunit beta, and dynamin. These results indicate that CLP259 in trophozoites is a CSK linker protein for actin and tubulin and could act as a scaffold protein driving vesicular traffic.

Indexed as

ActinsAmino Acid SequenceAnimalsAnkyrinsBase SequenceBlotting, WesternComputational BiologyConsensus SequenceCytoplasmCytoskeletonDynaminsFemaleFluorescent Antibody TechniqueGiardia lambliaHumansImmunoprecipitationActinsAnkyrinsDynaminsPlakinsTubulinCoiled-coilCytoskeletonGiardia intestinalisVesicular traffic

Identifiers

PMID33515065
OpenAlexW3125903352

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.