Evidence map›Paper›PMID 33514863›Full record

ArticleCommunications biology2021

A hypomorphic variant in EYS detected by genome-wide association study contributes toward retinitis pigmentosa.

Koji M Nishiguchi, Fuyuki Miya, Yuka Mori, Kosuke Fujita, Masato Akiyama, Takashi Kamatani, Yoshito Koyanagi, Kota Sato, Toru Takigawa, Shinji Ueno and 15 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 2 pooled it
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 2 syntheses or guidelines pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Guideline
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Relationships between causative genes and epiretinal membrane formation in Japanese patients with retinitis pigmentosa.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2024
    Observational
  10. Ocular genetics in the Japanese population.Japanese journal of ophthalmology · 2024
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 10 institutions in 3 countries.

Koji M Nishiguchi *Department of Ophthalmology, Tohoku University Graduate School of Medicine, Aoba-ku, Sendai, Japan. kmn@med.nagoya-u.ac.jp.
Fuyuki Miya *Department of Medical Science Mathematics, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo, Japan.ORCID 0000-0001-6758-2015
Yuka MoriDepartment of Biomedical Informatics, Osaka University Graduate School of Medicine, Suita, Japan.
Kosuke FujitaDepartment of Ophthalmology, Nagoya University Graduate School of Medicine, Showa-ku, Nagoya, Japan.
Masato AkiyamaLaboratory for Statistical Analysis, Center for Integrative Medical Sciences, RIKEN, Tsurumi-ku, Yokohama, Japan.
Takashi KamataniDepartment of Medical Science Mathematics, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo, Japan.
Yoshito KoyanagiLaboratory for Statistical Analysis, Center for Integrative Medical Sciences, RIKEN, Tsurumi-ku, Yokohama, Japan.
Kota SatoDepartment of Ophthalmology, Tohoku University Graduate School of Medicine, Aoba-ku, Sendai, Japan.ORCID 0000-0002-0176-5545
Toru TakigawaDepartment of Biomedical Informatics, Osaka University Graduate School of Medicine, Suita, Japan.
Shinji UenoDepartment of Ophthalmology, Nagoya University Graduate School of Medicine, Showa-ku, Nagoya, Japan.
Misato TsugitaDepartment of Ophthalmology, Tohoku University Graduate School of Medicine, Aoba-ku, Sendai, Japan.
Hiroshi KunikataDepartment of Ophthalmology, Tohoku University Graduate School of Medicine, Aoba-ku, Sendai, Japan.
Katarina CisarovaUnit of Medical Genetics, Department of Computational Biology, University of Lausanne, Lausanne, Switzerland.
Jo NishinoDepartment of Medical Science Mathematics, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo, Japan.
Akira MurakamiDepartment of Ophthalmology, Juntendo University Graduate School of Medicine, Bunkyo-ku, Tokyo, Japan.ORCID 0000-0002-0022-2514
Toshiaki AbeDivision of Clinical Cell Therapy, United Centers for Advanced Research and Translational Medicine (ART), Tohoku University Graduate School of Medicine, Aoba-ku, Sendai, Japan.
Yukihide MomozawaLaboratory for Genotyping Development, RIKEN Center for Integrative Medical Sciences,, Tsurumi-ku, Yokohama, Japan.
Hiroko TerasakiDepartment of Ophthalmology, Nagoya University Graduate School of Medicine, Showa-ku, Nagoya, Japan.
Yuko WadaYuko Wada Eye Clinic, Aoba-ku, Sendai, Japan.
Koh-Hei SonodaDepartment of Ophthalmology, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan.
Carlo RivoltaClinical Research Center, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel, Switzerland.ORCID 0000-0002-0733-9950
Tatsuhiko TsunodaDepartment of Medical Science Mathematics, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo, Japan.ORCID 0000-0002-5439-7918
Motokazu TsujikawaDepartment of Biomedical Informatics, Osaka University Graduate School of Medicine, Suita, Japan.
Yasuhiro IkedaDepartment of Ophthalmology, Graduate School of Medical Sciences, Kyushu University, Higashi-ku, Fukuoka, Japan.
Toru NakazawaDepartment of Ophthalmology, Tohoku University Graduate School of Medicine, Aoba-ku, Sendai, Japan.
Tohoku University · JPTokyo Medical and Dental University · JPKyushu University · JPThe University of Osaka · JPNagoya University · JPJuntendo University · JPRIKEN Center for Integrative Medical Sciences · JPUniversity of Lausanne · CHUniversity of Leicester · GBUniversity of Miyazaki · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic basis of Japanese autosomal recessive retinitis pigmentosa (ARRP) remains largely unknown. Herein, we applied a 2-step genome-wide association study (GWAS) in 640 Japanese patients. Meta-GWAS identified three independent peaks at P < 5.0 × 10

Indexed as

MutationPolymorphism, Single NucleotideAnimalsAsian PeopleCase-Control StudiesCell LineEye ProteinsGenetic Predisposition to DiseaseGenome-Wide Association StudyHigh-Throughput Nucleotide SequencingHumansJapanLinkage DisequilibriumPhenotypeRetinitis PigmentosaRisk AssessmentEye ProteinsEYS protein, humanEYS protein, zebrafishZebrafish Proteins

Identifiers

PMID33514863
PMCPMC7846782
OpenAlexW3124040805

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.