Evidence map›Paper›PMID 33511573›Full record

ArticleGenes & genomics2021

Transcriptome profiling of olive flounder responses under acute and chronic heat stress.

Woo-Jin Kim, Kyubin Lee, Dain Lee, Hyun-Chul Kim, Bo-Hye Nam, Hyungtaek Jung, Sun-Ju Yi, Kyunghwan Kim

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Article in Genes & genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Woo-Jin KimGenetics and Breeding Research Center, National Institute of Fisheries Science, Geoje, 53334, Republic of Korea.
Kyubin LeeSchool of Biological Sciences, College of Natural Sciences, Chungbuk National University, Cheongju, Chungbuk, 28644, Republic of Korea.
Dain LeeGenetics and Breeding Research Center, National Institute of Fisheries Science, Geoje, 53334, Republic of Korea.
Hyun-Chul KimGenetics and Breeding Research Center, National Institute of Fisheries Science, Geoje, 53334, Republic of Korea.
Bo-Hye NamBiotechnology Research Division, National Institute of Fisheries Science, Busan, 46083, Republic of Korea.
Hyungtaek JungSchool of Biological Sciences, The University of Queensland, St Lucia, QLD, 4072, Australia.
Sun-Ju YiSchool of Biological Sciences, College of Natural Sciences, Chungbuk National University, Cheongju, Chungbuk, 28644, Republic of Korea.
Kyunghwan KimSchool of Biological Sciences, College of Natural Sciences, Chungbuk National University, Cheongju, Chungbuk, 28644, Republic of Korea. kyungkim@chungbuk.ac.kr.
National Fisheries Research and Development Institute · KRChungbuk National University · KRUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe olive flounder (Paralichthys olivaceus) is a saltwater fish, which is valuable to the economy. The olive flounder strives to adapt to environmental stressors through physiological, biochemical, and transcriptional responses. The rise in water temperature threatens the growth, development, reproduction, and survival of olive flounder. Each organ in the olive flounder can differentially respond to heat stress.

objectivesThe purpose of this study is to investigate organ-specific transcriptional changes in olive flounder tissues during heat stress.

methodsIn this study, transcriptome dynamics of the gill, liver, and muscle of olive flounder to acute or chronic heat stress were investigated.

resultsPrincipal component analysis plotting revealed that the transcriptome of each organ is quite separated. K-means clustering, gene ontology, and Kyoto Encyclopedia of Genes and Genomes pathway analysis showed the differential transcriptome responses of each organ to heat stress. Heat stress commonly affects the pathways involved in the correct protein folding, DNA repair, and cell cycle.

conclusionOur results may provide a valuable molecular basis of heat acclimation in fishes.

Indexed as

Heat-Shock ResponseTranscriptomeAcclimatizationAnimalsFish ProteinsFlounderGillsLiverMuscle, SkeletalFish ProteinsHeat stressOlive flounderParalichthys olivaceusTranscriptome

Identifiers

PMID33511573
OpenAlexW3121316348

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.