Evidence map›Paper›PMID 33510353›Full record

ArticleScientific reports2021

Network theoretic analysis of JAK/STAT pathway and extrapolation to drugs and viruses including COVID-19.

Arindam Banerjee, Rudra Prosad Goswami, Moumita Chatterjee

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Tofacitinib Associated with Reduced Intubation Rates in the Management of Severe COVID-19 Pneumonia: A Preliminary Experience.Indian journal of critical care medicine : peer-reviewed, official publication of Indian Society of Critical Care Medicine · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Arindam Banerjee *Department of Mathematics, Ramakrishna Mission Vivekananda Educational and Research Institute, Belur, India.
Rudra Prosad Goswami *Department of Rheumatology, All India Institute of Medical Sciences, New Delhi, India. rudra.goswami@gmail.com.
Moumita Chatterjee *Department of Mathematics and Statistics, Aliah University, Kolkata, India.
Aliah University · INAll India Institute of Medical Sciences · INRamakrishna Mission Vidyamandira · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Whenever some phenomenon can be represented as a graph or a network it seems pertinent to explore how much the mathematical properties of that network impact the phenomenon. In this study we explore the same philosophy in the context of immunology. Our objective was to assess the correlation of "size" (number of edges and minimum vertex cover) of the JAK/STAT network with treatment effect in rheumatoid arthritis (RA), phenotype of viral infection and effect of immunosuppressive agents on a system infected with the coronavirus. We extracted the JAK/STAT pathway from Kyoto Encyclopedia of Genes and Genomes (KEGG, hsa04630). The effects of the following drugs, and their combinations, commonly used in RA were tested: methotrexate, prednisolone, rituximab, tocilizumab, tofacitinib and baricitinib. Following viral systems were also tested for their ability to evade the JAK/STAT pathway: Measles, Influenza A, West Nile virus, Japanese B virus, Yellow Fever virus, respiratory syncytial virus, Kaposi's sarcoma virus, Hepatitis B and C virus, cytomegalovirus, Hendra and Nipah virus and Coronavirus. Good correlation of edges and minimum vertex cover with clinical efficacy were observed (for edge, rho =  - 0.815, R

Indexed as

Antibodies, Monoclonal, HumanizedArthritis, RheumatoidAzetidinesGene Regulatory NetworksHumansJanus KinasesMethotrexateModels, StatisticalPiperidinesPrednisolonePurinesPyrazolesPyrimidinesRituximabSignal TransductionSTAT Transcription FactorsAntibodies, Monoclonal, HumanizedAzetidinesbaricitinibJanus KinasesMethotrexatePiperidinesPrednisolonePurinesPyrazolesPyrimidinesRituximabSTAT Transcription FactorsSulfonamidestocilizumabtofacitinib

Identifiers

PMID33510353
PMCPMC7844052
OpenAlexW3117445270

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.