Evidence map›Paper›PMID 33510218›Full record

ArticleScientific reports2021

A novel method for visualizing and tracking endogenous mRNA in a specific cell population in pathological neovascularization.

Md Imam Uddin, Tyler C Kilburn, Sara Z Jamal, Craig L Duvall, John S Penn

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Md Imam UddinDepartment of Ophthalmology and Visual Sciences, Vanderbilt University School of Medicine, AA1324 Medical Center North, Nashville, TN, 37232, USA. md.i.uddin@Vanderbilt.Edu.
Tyler C KilburnDepartment of Ophthalmology and Visual Sciences, Vanderbilt University School of Medicine, AA1324 Medical Center North, Nashville, TN, 37232, USA.
Sara Z JamalDepartment of Ophthalmology and Visual Sciences, Vanderbilt University School of Medicine, AA1324 Medical Center North, Nashville, TN, 37232, USA.
Craig L DuvallDepartment of Biomedical Engineering, Vanderbilt University School of Engineering, Nashville, TN, USA.
John S PennDepartment of Ophthalmology and Visual Sciences, Vanderbilt University School of Medicine, AA1324 Medical Center North, Nashville, TN, 37232, USA.
Vanderbilt University · US

Funding

Coordinating and Bioinformatics Unit for the MMPC/DiaCompU24DK076169 · NIDDK · AUGUSTA UNIVERSITY · PI MCINDOE, RICHARD A. · 2006 to 2018
$42.4M
Vanderbilt Diabetes Research CenterP30DK020593 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ALVIN C POWERS · 2012 to 2026
$29.3M
Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI David J. Calkins · 1989 to 2026
$19.6M
Coordinating Unit for DiaCompU24DK115255 · NIDDK · AUGUSTA UNIVERSITY · PI MCINDOE, RICHARD A. · 2017 to 2020
$11.6M
In Vivo Molecular Imaging of the RetinaR01EY023397 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PENN, JOHN S., UDDIN, MD IMAM · 2013 to 2022
$3.6M
In Vivo Molecular Imaging of Vascular Disease of the RetinaR01EY029693 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI UDDIN, MD IMAM · 2019 to 2023
$2.1M
Replacement and Upgrade of an Optical Imaging System for Small AnimalsS10OD021804 · OD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GORE, JOHN C · 2017 to 2017
$409k
NEI NIH HHS P30 EY008126NEI NIH HHS R01 EY023397NEI NIH HHS R01 EY029693NIDDK NIH HHS P30 DK020593NIDDK NIH HHS U24 DK076169NIDDK NIH HHS U24 DK115255NIH HHS S10 OD021804
6 · The paper itself

Abstract

Diabetic retinopathy, retinopathy of prematurity and retinal vein occlusion are potentially blinding conditions largely due to their respective neovascular components. The development of real-time in vivo molecular imaging methods, to assess levels of retinal neovascularization (NV), would greatly benefit patients afflicted with these conditions. mRNA hybridization techniques offer a potential method to image retinal NV. The success of these techniques hinges on the selection of a target mRNA whose tissue levels and spatial expression patterns correlate closely with disease burden. Using a model of oxygen-induced retinopathy (OIR), we previously observed dramatic increases in retinal endoglin that localized to neovascular structures (NV), directly correlating with levels of neovascular pathology. Based on these findings, we have investigated Endoglin mRNA as a potential marker for imaging retinal NV in OIR mice. Also of critical importance, is the application of innovative technologies capable of detecting mRNAs in living systems with high sensitivity and specificity. To detect and visualize endoglin mRNA in OIR mice, we have designed and synthesized a novel imaging probe composed of short-hairpin anti-sense (AS) endoglin RNA coupled to a fluorophore and black hole quencher (AS-Eng shRNA). This assembly allows highly sensitive fluorescence emission upon hybridization of the AS-Eng shRNA to cellular endoglin mRNA. The AS-Eng shRNA is further conjugated to a diacyl-lipid (AS-Eng shRNA-lipid referred to as probe). The lipid moiety binds to serum albumin facilitating enhanced systemic circulation of the probe. OIR mice received intraperitoneal injections of AS-Eng shRNA-lipid. Ex vivo imaging of their retinas revealed specific endoglin mRNA dependent fluorescence superimposed on neovascular structures. Room air mice receiving AS-Eng shRNA-lipid and OIR mice receiving a non-sense control probe showed little fluorescence activity. In addition, we found that cells in neovascular lesions labelled with endoglin mRNA dependent fluorescence, co-labelled with the macrophage/microglia-associated marker IBA1. Others have shown that cells expressing macrophage/microglia markers associate with retinal neovascular structures in proportion to disease burden. Hence we propose that our probe may be used to image and to estimate the levels of retinal neovascular disease in real-time in living systems.

Indexed as

AnimalsCell SurvivalDynamic Light ScatteringFemaleHumansMiceMice, Inbred C57BLMicroscopy, Electron, TransmissionMicroscopy, FluorescenceNeovascularization, PathologicPregnancyRetinaRNA, MessengerRNA, Messenger

Identifiers

PMID33510218
PMCPMC7844016
OpenAlexW3121159646

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.