Evidence map›Paper›PMID 33510146›Full record

ArticleNature communications2021

Long-term single-cell imaging and simulations of microtubules reveal principles behind wall patterning during proto-xylem development.

René Schneider, Kris Van't Klooster, Kelsey L Picard, Jasper van der Gucht, Taku Demura, Marcel Janson, Arun Sampathkumar, Eva E Deinum, Tijs Ketelaar, Staffan Persson

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  8. An ABA-ROP toggle switch orchestrates xylem differentiation and cell wall patterning.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  20. Microtubule nucleation complex behavior is critical for cortical array homogeneityProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 6 countries.

René Schneider *School of Biosciences, University of Melbourne, Parkville, VIC, 3010, Australia.
Kris Van't Klooster *Laboratory of Cell Biology, Wageningen University, Wageningen, The Netherlands.ORCID 0000-0003-1524-043X
Kelsey L PicardSchool of Biosciences, University of Melbourne, Parkville, VIC, 3010, Australia.
Jasper van der GuchtPhysical Chemistry and Soft Matter, Wageningen University, Wageningen, The Netherlands.
Taku DemuraGraduate School of Biological Sciences, Nara Institute of Science and Technology, Ikoma, Nara, 630-0192, Japan.ORCID 0000-0002-2499-4738
Marcel JansonLaboratory of Cell Biology, Wageningen University, Wageningen, The Netherlands.
Arun SampathkumarMax Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, 14476, Potsdam, Germany.ORCID 0000-0003-1703-0137
Eva E DeinumMathematical and Statistical Methods (Biometris), Wageningen University, Wageningen, The Netherlands. eva.deinum@wur.nl.ORCID 0000-0001-8564-200X
Tijs KetelaarLaboratory of Cell Biology, Wageningen University, Wageningen, The Netherlands. tijs.ketelaar@wur.nl.ORCID 0000-0001-9506-7264
Staffan PerssonSchool of Biosciences, University of Melbourne, Parkville, VIC, 3010, Australia. staffan.persson@plen.ku.dk.
Wageningen University & Research · NLMax Planck Institute of Molecular Plant Physiology · DENara Institute of Science and Technology · JPThe University of Melbourne · AUUniversity of Copenhagen · DKUniversity of Tasmania · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants are the tallest organisms on Earth; a feature sustained by solute-transporting xylem vessels in the plant vasculature. The xylem vessels are supported by strong cell walls that are assembled in intricate patterns. Cortical microtubules direct wall deposition and need to rapidly re-organize during xylem cell development. Here, we establish long-term live-cell imaging of single Arabidopsis cells undergoing proto-xylem trans-differentiation, resulting in spiral wall patterns, to understand microtubule re-organization. We find that the re-organization requires local microtubule de-stabilization in band-interspersing gaps. Using microtubule simulations, we recapitulate the process in silico and predict that spatio-temporal control of microtubule nucleation is critical for pattern formation, which we confirm in vivo. By combining simulations and live-cell imaging we further explain how the xylem wall-deficient and microtubule-severing KATANIN contributes to microtubule and wall patterning. Hence, by combining quantitative microscopy and modelling we devise a framework to understand how microtubule re-organization supports wall patterning.

Indexed as

ArabidopsisCell WallHypocotylMicroscopy, FluorescenceMicrotubulesPlants, Genetically ModifiedSingle-Cell AnalysisTime-Lapse ImagingXylem

Identifiers

PMID33510146
PMCPMC7843992
OpenAlexW3124506836

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.