Evidence map›Paper›PMID 33509299›Full record

ArticleGenes and environment : the official journal of the Japanese Environmental Mutagen Society2021

Species diversity and molecular analysis of opportunistic Mycobacterium, Nocardia and Rhodococcus isolated from the hospital environment in a developing country, a potential resources for nosocomial infection.

Marzieh Siavashifar, Fatemeh Rezaei, Tahereh Motallebirad, Davood Azadi, Abdorrahim Absalan, Zahra Naserramezani, Mohadeseh Golshani, Morteza Jafarinia, Kazem Ghaffari

Erratum issuedAbstract read
In one paragraph

Article in Genes and environment : the official journal of the Japanese Environmental Mutagen Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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  7. Review
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  9. Article
  10. Dual Infection of an Open Fracture Caused byAntibiotics (Basel, Switzerland) · 2022
    Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Marzieh SiavashifarStudent Research Comitee, Khomein University of Medical Sciences, Khomein, Iran.
Fatemeh RezaeiStudent Research Comitee, Khomein University of Medical Sciences, Khomein, Iran.
Tahereh MotallebiradDepartment of Basic and Laboratory and Sciences, Khomein University of Medical Sciences, Qods street, Khomein, Iran.
Davood AzadiDepartment of Basic and Laboratory and Sciences, Khomein University of Medical Sciences, Qods street, Khomein, Iran. Davood.azadi@gmail.com.ORCID http://orcid.org/0000-0002-7641-7035
Abdorrahim AbsalanDepartment of Basic and Laboratory and Sciences, Khomein University of Medical Sciences, Qods street, Khomein, Iran.
Zahra NaserramezaniStudent Research Comitee, Khomein University of Medical Sciences, Khomein, Iran.
Mohadeseh GolshaniStudent Research Comitee, Khomein University of Medical Sciences, Khomein, Iran.
Morteza JafariniaDepartment of Immunology, School of Medicine, Isfahan University Of Medical Sciences, Isfahan, Iran.
Kazem GhaffariDepartment of Basic and Laboratory and Sciences, Khomein University of Medical Sciences, Qods street, Khomein, Iran.

Funding

khomein university of medical sciences 98000018
6 · The paper itself

Abstract

backgroundHospital environmental resources have a significant role in cross-transmission of opportunistic pathogens such as actinomycetes species to the patients. Actinomycetes have a remarkable capability to survive in adverse and harsh conditions of hospital environments; therefore, they are a threat to the health of patients. Due to this issue, we aimed to determine the frequency and diversity of actinomycetes species in hospital soil, water and dust by using a combination of conventional and molecular methods including the phenotypic and biochemical tests for preliminary identification and the PCR amplification of the specific region of the 16S rRNA, hsp65 gene and sequence analyses of 16S rRNA for the genus and species identification.

resultsA total of 50 (35.2%) actinomycetes isolates from 7 genera were isolated from 142 hospital environmental samples. The three most prevalent species were M. setense 10%, R. erythropolis and M. fortuitum 8% followed by N.cyriacigeorgica and M. gordonae 6%, M. chelonae, M. abscessus, M. lentiflavum, M. mucogenicum, N. asteroides, N. farcinica, R. equi and L. shinushuensis 4% and the single isolates of M. conceptionense, M. septicum, N. rhamnosophilia, N. bravicatena, M. flavescens, M. arupense, M. doricum, M. frederiksbergense, S. heliomycini, S. albus, S. albogriseolus, R. facians, D. maris, G. terae and A. globiformis.

conclusionsIn conclusion we showed that the hospital environment is a potential reservoir for a broad range of actinomycetes species, due to the remarkable survival capability of these microorganisms in adverse hospital environment, carrying a threat to the health of patients.

Indexed as

16S rRNAActinomycetesHospital environmentNosocomial infection

Identifiers

PMID33509299
PMCPMC7844956

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.