Evidence map›Paper›PMID 33508018›Full record

ArticlePloS one2021

Comparing lifeact and phalloidin for super-resolution imaging of actin in fixed cells.

Hanieh Mazloom-Farsibaf, Farzin Farzam, Mohamadreza Fazel, Michael J Wester, Marjolein B M Meddens, Keith A Lidke

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. ADPact: A versatile sensor for ADP-F-actin.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Article
  6. Review
  7. IMA fungus · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hanieh Mazloom-FarsibafDepartment of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, United States of America.
Farzin FarzamDepartment of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, United States of America.
Mohamadreza FazelDepartment of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, United States of America.
Michael J WesterDepartment of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, United States of America.ORCID 0000-0002-3520-7605
Marjolein B M MeddensDepartment of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, United States of America.
Keith A LidkeDepartment of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, United States of America.ORCID 0000-0002-9328-4318
University of New Mexico · US

Funding

WOMEN'S CANCERS RESEARCH PROGRAMP30CA118100 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Yolanda Sanchez · 2005 to 2026
$57.1M
UNM TRAININGP50GM085273 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI LIDKE, KEITH A · 2009 to 2018
$26.1M
Structural and Functional Interactions within the Neuronal ER/PM JunctionR01GM109888 · NIGMS · COLORADO STATE UNIVERSITY · PI BEAM, KURT G, KRAFT, MARY L · 2014 to 2017
$1.5M
Multi-target super-resolution imaging using sequential labelingR21EB019589 · NIBIB · UNIVERSITY OF NEW MEXICO · PI LIDKE, KEITH A · 2015 to 2016
$390k
NCI NIH HHS P30 CA118100NIBIB NIH HHS R21 EB019589NIGMS NIH HHS P50 GM085273NIGMS NIH HHS R01 GM109888
6 · The paper itself

Abstract

Visualizing actin filaments in fixed cells is of great interest for a variety of topics in cell biology such as cell division, cell movement, and cell signaling. We investigated the possibility of replacing phalloidin, the standard reagent for super-resolution imaging of F-actin in fixed cells, with the actin binding peptide 'lifeact'. We compared the labels for use in single molecule based super-resolution microscopy, where AlexaFluor 647 labeled phalloidin was used in a dSTORM modality and Atto 655 labeled lifeact was used in a single molecule imaging, reversible binding modality. We found that imaging with lifeact had a comparable resolution in reconstructed images and provided several advantages over phalloidin including lower costs, the ability to image multiple regions of interest on a coverslip without degradation, simplified sequential super-resolution imaging, and more continuous labeling of thin filaments.

Indexed as

Actin CytoskeletonCarbocyaninesHeLa CellsHumansMicroscopy, FluorescencePhalloidineAlexa Fluor 647CarbocyaninesPhalloidine

Identifiers

PMID33508018
PMCPMC7842966
OpenAlexW3123095577

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.