ArticlePLoS computational biology2021
Graph neural fields: A framework for spatiotemporal dynamical models on the human connectome.
Article in PLoS computational biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed.
- Cortical neuron classes and recursive curvature collapse: a neurobiological model of conscious dynamics.Theory in biosciences = Theorie in den Biowissenschaften · 2026Article
- High-resolution Bayesian Virtual Epileptic Patient using neural field models.Network neuroscience (Cambridge, Mass.) · 2026Article
- Large-scale comparative analysis reveals top graph signal processing features for subject identification.bioRxiv : the preprint server for biology · 2025Article
- Mapping the white-matter functional connectome: a personal perspective.Psychoradiology · 2025Review
- Metric structural human connectomes: Localization and multifractality of eigenmodes.Network neuroscience (Cambridge, Mass.) · 2025Article
- Beyond-local neural information processing in neuronal networks.Computational and structural biotechnology journal · 2024Article
- Criticality and partial synchronization analysis in Wilson-Cowan and Jansen-Rit neural mass models.PloS one · 2024Article
- Connectivity of high-frequency bursts as SOZ localization biomarker.Frontiers in network physiology · 2024Article
- Simulations approaching data: cortical slow waves in inferred models of the whole hemisphere of mouse.Communications biology · 2023Article
- Predicting time-resolved electrophysiological brain networks from structural eigenmodes.Human brain mapping · 2022Article
- Article
- Correction: Graph neural fields: A framework for spatiotemporal dynamical models on the human connectome.PLoS computational biology · 2022Article
- Diffusion-informed spatial smoothing of fMRI data in white matter using spectral graph filters.NeuroImage · 2021Article
- DotMotif: an open-source tool for connectome subgraph isomorphism search and graph queries.Scientific reports · 2021Article
- Gradients of connectivity as graph Fourier bases of brain activity.Network neuroscience (Cambridge, Mass.) · 2021Article
Corrections and comments
- Erratum issued
Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Tools from the field of graph signal processing, in particular the graph Laplacian operator, have recently been successfully applied to the investigation of structure-function relationships in the human brain. The eigenvectors of the human connectome graph Laplacian, dubbed "connectome harmonics", have been shown to relate to the functionally relevant resting-state networks. Whole-brain modelling of brain activity combines structural connectivity with local dynamical models to provide insight into the large-scale functional organization of the human brain. In this study, we employ the graph Laplacian and its properties to define and implement a large class of neural activity models directly on the human connectome. These models, consisting of systems of stochastic integrodifferential equations on graphs, are dubbed graph neural fields, in analogy with the well-established continuous neural fields. We obtain analytic predictions for harmonic and temporal power spectra, as well as functional connectivity and coherence matrices, of graph neural fields, with a technique dubbed CHAOSS (shorthand for Connectome-Harmonic Analysis Of Spatiotemporal Spectra). Combining graph neural fields with appropriate observation models allows for estimating model parameters from experimental data as obtained from electroencephalography (EEG), magnetoencephalography (MEG), or functional magnetic resonance imaging (fMRI). As an example application, we study a stochastic Wilson-Cowan graph neural field model on a high-resolution connectome graph constructed from diffusion tensor imaging (DTI) and structural MRI data. We show that the model equilibrium fluctuations can reproduce the empirically observed harmonic power spectrum of resting-state fMRI data, and predict its functional connectivity, with a high level of detail. Graph neural fields natively allow the inclusion of important features of cortical anatomy and fast computations of observable quantities for comparison with multimodal empirical data. They thus appear particularly suitable for modelling whole-brain activity at mesoscopic scales, and opening new potential avenues for connectome-graph-based investigations of structure-function relationships.
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