Evidence map›Paper›PMID 33507899›Full record

ArticlePLoS computational biology2021

Graph neural fields: A framework for spatiotemporal dynamical models on the human connectome.

Marco Aqil, Selen Atasoy, Morten L Kringelbach, Rikkert Hindriks

Erratum issuedAbstract read
In one paragraph

Article in PLoS computational biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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  6. Beyond-local neural information processing in neuronal networks.Computational and structural biotechnology journal · 2024
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  15. Gradients of connectivity as graph Fourier bases of brain activity.Network neuroscience (Cambridge, Mass.) · 2021
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Marco AqilDepartment of Mathematics, Vrije Universiteit, Amsterdam, The Netherlands.ORCID 0000-0003-3361-3156
Selen AtasoyCentre for Eudaimonia and Human Flourishing, University of Oxford, Oxford, United Kingdom.ORCID 0000-0002-8213-8462
Morten L KringelbachCentre for Eudaimonia and Human Flourishing, University of Oxford, Oxford, United Kingdom.
Rikkert HindriksDepartment of Mathematics, Vrije Universiteit, Amsterdam, The Netherlands.ORCID 0000-0003-3575-186X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tools from the field of graph signal processing, in particular the graph Laplacian operator, have recently been successfully applied to the investigation of structure-function relationships in the human brain. The eigenvectors of the human connectome graph Laplacian, dubbed "connectome harmonics", have been shown to relate to the functionally relevant resting-state networks. Whole-brain modelling of brain activity combines structural connectivity with local dynamical models to provide insight into the large-scale functional organization of the human brain. In this study, we employ the graph Laplacian and its properties to define and implement a large class of neural activity models directly on the human connectome. These models, consisting of systems of stochastic integrodifferential equations on graphs, are dubbed graph neural fields, in analogy with the well-established continuous neural fields. We obtain analytic predictions for harmonic and temporal power spectra, as well as functional connectivity and coherence matrices, of graph neural fields, with a technique dubbed CHAOSS (shorthand for Connectome-Harmonic Analysis Of Spatiotemporal Spectra). Combining graph neural fields with appropriate observation models allows for estimating model parameters from experimental data as obtained from electroencephalography (EEG), magnetoencephalography (MEG), or functional magnetic resonance imaging (fMRI). As an example application, we study a stochastic Wilson-Cowan graph neural field model on a high-resolution connectome graph constructed from diffusion tensor imaging (DTI) and structural MRI data. We show that the model equilibrium fluctuations can reproduce the empirically observed harmonic power spectrum of resting-state fMRI data, and predict its functional connectivity, with a high level of detail. Graph neural fields natively allow the inclusion of important features of cortical anatomy and fast computations of observable quantities for comparison with multimodal empirical data. They thus appear particularly suitable for modelling whole-brain activity at mesoscopic scales, and opening new potential avenues for connectome-graph-based investigations of structure-function relationships.

Indexed as

BrainModels, NeurologicalNerve NetComputational BiologyConnectomeElectroencephalographyHumansMagnetic Resonance ImagingMagnetoencephalography

Identifiers

PMID33507899
PMCPMC7872285

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.