Evidence map›Paper›PMID 33507397›Full record

ArticlePlanta2021

The promoter sequences of lettuce cis-prenyltransferase and its binding protein specify gene expression in laticifers.

Elysabeth K Barnes, Moonhyuk Kwon, Connor L Hodgins, Yang Qu, Seon-Won Kim, Edward C Yeung, Dae-Kyun Ro

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In one paragraph

Article in Planta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Elysabeth K Barnes *Department of Biological Sciences, University of Calgary, Calgary, AB, T2N 1N4, Canada.
Moonhyuk Kwon *Department of Biological Sciences, University of Calgary, Calgary, AB, T2N 1N4, Canada.
Connor L HodginsDepartment of Biological Sciences, University of Calgary, Calgary, AB, T2N 1N4, Canada.
Yang QuDepartment of Chemistry, University of New Brunswick Fredericton, Fredericton, E3B 5A3, Canada.
Seon-Won KimDivision of Applied Life Sciences (BK21 Plus), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, Republic of Korea.
Edward C YeungDepartment of Biological Sciences, University of Calgary, Calgary, AB, T2N 1N4, Canada.
Dae-Kyun RoDepartment of Biological Sciences, University of Calgary, Calgary, AB, T2N 1N4, Canada. daekyun.ro@ucalgary.ca.ORCID http://orcid.org/0000-0003-1288-5347
University of Calgary · CAGyeongsang National University · KRUniversity of New Brunswick · CA

Funding

National Research Foundation of Korea 2017R1A6A3A03003409Natural Sciences and Engineering Research Council of Canada 04874-2017Rural development Administration of Korea PJ01326501
6 · The paper itself

Abstract

MAIN

conclusionPromoters of lettuce cis-prenyltransferase 3 (LsCPT3) and CPT-binding protein 2 (LsCBP2) specify gene expression in laticifers, as supported by in situ β-glucuronidase stains and microsection analysis. Lettuce (Lactuca sativa) has articulated laticifers alongside vascular bundles. In the cytoplasm of laticifers, natural rubber (cis-1,4-polyisoprene) is synthesized by cis-prenyltransferase (LsCPT3) and CPT-binding protein (LsCBP2), both of which form an enzyme complex. Here we determined the gene structures of LsCPT3 and LsCBP2 and characterized their promoter activities using β-glucuronidase (GUS) reporter assays in stable transgenic lines of lettuce. LsCPT3 has a single 7.4-kb intron while LsCBP2 has seven introns including a 940-bp intron in the 5'-untranslated region (UTR). Serially truncated LsCPT3 promoters (2.3 kb, 1.6 kb, and 1.1 kb) and the LsCBP2 promoter with (1.7 kb) or without (0.8 kb) the 940-bp introns were fused to GUS to examine their promoter activities. In situ GUS stains of the transgenic plants revealed that the 1.1-kb LsCPT3 and 0.8-kb LsCBP2 promoter without the 5'-UTR intron are sufficient to express GUS exclusively in laticifers. Fluorometric assays showed that the LsCBP2 promoter was several-fold stronger than the CaMV35S promoter and was ~ 400 times stronger than the LsCPT3 promoter in latex. Histochemical analyses confirmed that both promoters express GUS exclusively in laticifers, recognized by characteristic fused multicellular structures. We concluded that both the LsCPT3 and LsCBP2 promoters specify gene expression in laticifers, and the LsCBP2 promoter displays stronger expression than the CaMV35S promoter in laticifers. For the LsCPT3 promoter, it appears that unknown cis-elements outside of the currently examined LsCPT3 promoter are required to enhance LsCPT3 expression.

Indexed as

Gene Expression Regulation, PlantLactucaCarrier ProteinsGene ExpressionGlucuronidasePlants, Genetically ModifiedTransferasesCarrier Proteinscis-prenyl transferaseGlucuronidaseTransferasesCis-prenyltransferaseCis-prenyltransferase-binding proteinIsoprenoidLaticifersLettucePolyisoprene

Identifiers

PMID33507397
OpenAlexW3121206622

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.