ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021
Comparative selective signature analysis and high-resolution GWAS reveal a new candidate gene controlling seed weight in soybean.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
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Who cites it
27 citing papers in PubMed, 54 citations in OpenAlex.
- A High-Thousand-Seed-Weight Mutant ofInternational journal of molecular sciences · 2026Article
- Identification of candidate loci regulating seed-associated traits in soybean using genome-wide association study and image-based high-throughput phenotyping.Frontiers in plant science · 2026Article
- Genomic signatures of adaptation in seed traits in the wild plant Brassica incana.Communications biology · 2025Article
- Soybean genome‑wide association study of seed weight, protein, and oil content in the southeastern USA.Molecular genetics and genomics : MGG · 2025Article
- Knocking out artificially selected gene GmAOC4TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- GWAS analysis revealed genomic loci and candidate genes associated with the 100-seed weight in high-latitude-adapted soybean germplasm.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Residual networks without pooling layers improve the accuracy of genomic predictions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Genome-Wide Association Study and Identification of Candidate Genes Associated with Seed Number per Pod in Soybean.International journal of molecular sciences · 2024Article
- A genome-wide association analysis for salt tolerance during the soybean germination stage and development of KASP markers.Frontiers in plant science · 2024Article
- Identification of candidate genes and development of KASP markers for soybean shade-tolerance using GWAS.Frontiers in plant science · 2024Article
- Genome-wide association studies reveal novel QTLs for agronomic traits in soybean.Frontiers in plant science · 2024Article
- Development of KASP markers assisted with soybean drought tolerance in the germination stage based on GWAS.Frontiers in plant science · 2024Article
- Integrating genome-wide association studies with selective sweep reveals genetic loci associated with tolerance to low phosphate availability inMolecular breeding : new strategies in plant improvement · 2023Article
- Population size in QTL detection using quantile regression in genome-wide association studies.Scientific reports · 2023Article
- Major genetic locus with pleiotropism determined seed-related traits in cultivated and wild soybeans.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- The Genotypic Variability among Short-Season Soybean Cultivars for Nitrogen Fixation under Drought Stress.Plants (Basel, Switzerland) · 2023Article
- Genetic regulatory networks of soybean seed size, oil and protein contents.Frontiers in plant science · 2023Review
- Genome-wide association study as a powerful tool for dissecting competitive traits in legumes.Frontiers in plant science · 2023Review
- Genome-wide association study reveals that GhTRL1 and GhPIN8 affect cotton root development.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Discovery of genetic loci and causal genes for seed germination via deep re-sequencing in soybean.Molecular breeding : new strategies in plant improvement · 2022Article
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10 authors at 2 institutions in 1 country.
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Abstract
key messageWe detected a QTL qHSW-16 undergone strong selection associated with seed weight and identified a novel candidate gene controlling seed weight candidate gene for this major QTL by qRT-PCT. Soybean [Glycine max (L.) Merr.] provides more than half of the world's oilseed production. To expand its germplasm resources useful for breeding increased yield and oil quality cultivars, it is necessary to resolve the diversity and evolutionary history of this crop. In this work, we resequenced 283 soybean accessions from China and obtained a large number of high-quality SNPs for investigation of the population genetics that underpin variation in seed weight and other agronomic traits. Selective signature analysis detected 78 (~ 25.0 Mb) and 39 (~ 22.60 Mb) novel putative selective signals that were selected during soybean domestication and improvement, respectively. Genome-wide association study (GWAS) identified five loci associated with seed weight. Among these QTLs, qHSW-16, overlapped with the improvement-selective region on chromosome 16, suggesting that this QTL may be underwent strong selection during soybean improvement. Of the 18 candidate genes in qHSW-16, only SoyZH13_16G122400 showed higher expression levels in a large seed variety compared to a small seed variety during seed development. These results identify SoyZH13_16G122400 as a novel candidate gene controlling seed weight and provide foundational insights into the molecular targets for breeding improvement of seed weight and potential seed yield in soybean.
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