Evidence map›Paper›PMID 33504798›Full record

ArticleNature communications2021

The contribution of X-linked coding variation to severe developmental disorders.

Hilary C Martin, Eugene J Gardner, Kaitlin E Samocha, Joanna Kaplanis, Nadia Akawi, Alejandro Sifrim, Ruth Y Eberhardt, Ana Lisa Taylor Tavares, Matthew D C Neville, Mari E K Niemi and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
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  4. Review
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  8. Review
  9. Cellular Functional Analyses ofHuman mutation · 2026
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  10. Transcriptomic Convergence and the Female Protective Effect in Autism.bioRxiv : the preprint server for biology · 2025
    Article
  11. Article
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  16. Turner Syndrome Complicated by aJCEM case reports · 2025
    Article
  17. Review
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  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 20 institutions in 6 countries.

Hilary C MartinWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK. hcm@sanger.ac.uk.ORCID 0000-0002-4454-9084
Eugene J GardnerWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.ORCID 0000-0001-9671-1533
Kaitlin E SamochaWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.ORCID 0000-0002-1704-3352
Joanna KaplanisWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.
Nadia AkawiWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.
Alejandro SifrimWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.
Ruth Y EberhardtWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.ORCID 0000-0001-6152-1369
Ana Lisa Taylor TavaresWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.ORCID 0000-0001-7089-0502
Matthew D C NevilleWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.ORCID 0000-0001-5816-7936
Mari E K NiemiWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.ORCID 0000-0003-0696-6175
Giuseppe GalloneWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.
Jeremy McRaeWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.
Deciphering Developmental Disorders Study
Caroline F WrightInstitute of Biomedical & Clinical Science, University of Exeter Medical School, Exeter, EX2 5DW, UK.ORCID 0000-0003-2958-5076
David R FitzPatrickMRC Human Genetics Unit, MRC IGMM, University of Edinburgh, Western General Hospital, Edinburgh, EH4 2XU, UK.
Helen V FirthWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.
Matthew E HurlesWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.ORCID 0000-0002-2333-7015
Birmingham Women's Hospital · GBGuy's Hospital · GBSt Mary's Hospital · GBCambridge University Hospitals NHS Foundation Trust · GBGreat Ormond Street Hospital for Children NHS Foundation Trust · GBChapel Allerton Hospital · GBGlan Clwyd Hospital · GBNHS Greater Glasgow and Clyde · GBNottingham University Hospitals NHS Trust · GBRoyal Devon & Exeter NHS Foundation Trust · GBSalisbury District Hospital · GBBelfast Health and Social Care Trust · GBLondon North West Healthcare NHS Trust · GBSt George's, University of London · GBUniversity Hospitals Bristol NHS Foundation Trust · GBWellcome Sanger Institute · GBNewcastle upon Tyne Hospitals NHS Foundation Trust · GBSheffield Children's NHS Foundation Trust · GBUniversity of Liverpool · GBWestern General Hospital · GB

Funding

Department of HealthMedical Research Council MC_UU_00007/3Medical Research Council MR/V037307/1Wellcome TrustWellcome Trust WT098051
6 · The paper itself

Abstract

Over 130 X-linked genes have been robustly associated with developmental disorders, and X-linked causes have been hypothesised to underlie the higher developmental disorder rates in males. Here, we evaluate the burden of X-linked coding variation in 11,044 developmental disorder patients, and find a similar rate of X-linked causes in males and females (6.0% and 6.9%, respectively), indicating that such variants do not account for the 1.4-fold male bias. We develop an improved strategy to detect X-linked developmental disorders and identify 23 significant genes, all of which were previously known, consistent with our inference that the vast majority of the X-linked burden is in known developmental disorder-associated genes. Importantly, we estimate that, in male probands, only 13% of inherited rare missense variants in known developmental disorder-associated genes are likely to be pathogenic. Our results demonstrate that statistical analysis of large datasets can refine our understanding of modes of inheritance for individual X-linked disorders.

Indexed as

Genes, X-LinkedGenetic VariationChromosomes, Human, XDevelopmental DisabilitiesFemaleGenes, RecessiveGenetic Diseases, X-LinkedHumansInheritance PatternsMaleMultifactorial InheritanceMutationPhenotypeSex Characteristics

Identifiers

PMID33504798
PMCPMC7840967
OpenAlexW3122084917

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.