Evidence map›Paper›PMID 33504795›Full record

ArticleNature communications2021

Rpd3/CoRest-mediated activity-dependent transcription regulates the flexibility in memory updating in Drosophila.

Mai Takakura, Reiko Nakagawa, Takeshi Ota, Yoko Kimura, Man Yung Ng, Abdalla G Alia, Hiroyuki Okuno, Yukinori Hirano

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Differential second messenger signaling via dopamine neurons bidirectionally regulates memory retention.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Mai TakakuraHakubi Center, Kyoto University Graduate School of Medicine, Konoecho, Yoshida, Sakyo-ku, Kyoto, Kyoto, 606-8315, Japan.
Reiko NakagawaLaboratory for Phyloinformatics, RIKEN Center for Biosystems Dynamics Research, Kobe, 650-0047, Japan.ORCID http://orcid.org/0000-0002-6178-2945
Takeshi OtaShionogi & Co., Ltd, Laboratory for Innovative Therapy Research, Drug Discovery Technologies 1, Shionogi Pharmaceutical Research Center, 3-1-1, Futaba-cho, Toyonaka-shi, Osaka, 561-0825, Japan.
Yoko KimuraHakubi Center, Kyoto University Graduate School of Medicine, Konoecho, Yoshida, Sakyo-ku, Kyoto, Kyoto, 606-8315, Japan.
Man Yung NgDivision of Life Science, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong, China.
Abdalla G AliaDivision of Life Science, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong, China.
Hiroyuki OkunoDepartment of Biochemistry and Molecular Biology, Graduate School of Medical and Dental Sciences, Kagoshima University, Sakuragaoka, Kagoshima, 890-8544, Japan.
Yukinori HiranoHakubi Center, Kyoto University Graduate School of Medicine, Konoecho, Yoshida, Sakyo-ku, Kyoto, Kyoto, 606-8315, Japan. yukinori@ust.hk.
Hong Kong University of Science and Technology · HKKyoto University · JPKagoshima University · JPRIKEN Center for Biosystems Dynamics Research · JPShionogi (Japan) · JP

Funding

DROSOPHILA GENOMICS RESOURCE CENTERP40OD010949 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Andrew Zelhof · 2012 to 2026
$9.4M
Next-generation Drosophila cell lines to elucidate the cellular basis of human diseasesR24OD019847 · OD · HARVARD MEDICAL SCHOOL · PI PERRIMON, NORBERT, SIMCOX, AMANDA · 2017 to 2020
$2.7M
NIH HHS P40 OD010949NIH HHS R24 OD019847
6 · The paper itself

Abstract

Consolidated memory can be preserved or updated depending on the environmental change. Although such conflicting regulation may happen during memory updating, the flexibility of memory updating may have already been determined in the initial memory consolidation process. Here, we explored the gating mechanism for activity-dependent transcription in memory consolidation, which is unexpectedly linked to the later memory updating in Drosophila. Through proteomic analysis, we discovered that the compositional change in the transcriptional repressor, which contains the histone deacetylase Rpd3 and CoRest, acts as the gating mechanism that opens and closes the time window for activity-dependent transcription. Opening the gate through the compositional change in Rpd3/CoRest is required for memory consolidation, but closing the gate through Rpd3/CoRest is significant to limit future memory updating. Our data indicate that the flexibility of memory updating is determined through the initial activity-dependent transcription, providing a mechanism involved in defining memory state.

Indexed as

Transcription, GeneticAcetylationAnimalsBehavior, AnimalBrainCo-Repressor ProteinsDrosophila melanogasterDrosophila ProteinsGenetic LociHistone Deacetylase 1MemoryMushroom BodiesProtein BindingProtein Interaction MappingProtein Processing, Post-TranslationalRNA, MessengerCo-Repressor ProteinsCoREST protein, DrosophilaDrosophila ProteinsHDAC1 protein, DrosophilaHistone Deacetylase 1RNA, Messenger

Identifiers

PMID33504795
PMCPMC7840730
OpenAlexW3123083965

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.