Evidence map›Paper›PMID 33500517›Full record

ArticleCommunications biology2021

Breakdown of supersaturation barrier links protein folding to amyloid formation.

Masahiro Noji, Tatsushi Samejima, Keiichi Yamaguchi, Masatomo So, Keisuke Yuzu, Eri Chatani, Yoko Akazawa-Ogawa, Yoshihisa Hagihara, Yasushi Kawata, Kensuke Ikenaka and 6 more

Abstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Small heat shock proteins and biomolecular condensates.Cellular and molecular life sciences : CMLS · 2026
    Review
  2. The temperature dependence of amyloidProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Initiation of transthyretin aggregation at neutral pH by fluid agitation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Decoding Solubility Signatures from Amyloid Monomer Energy Landscapes.Journal of chemical theory and computation · 2025
    Article
  12. Article
  13. Article
  14. Review
  15. Aggregation of Transthyretin by Fluid Agitation.bioRxiv : the preprint server for biology · 2024
    Article
  16. Review
  17. Review
  18. Mechanisms and pathology of protein misfolding and aggregation.Nature reviews. Molecular cell biology · 2023
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Masahiro NojiInstitute for Protein Research, Osaka University, Yamadaoka 3-2, Suita, Osaka, 565-0871, Japan.
Tatsushi SamejimaInstitute for Protein Research, Osaka University, Yamadaoka 3-2, Suita, Osaka, 565-0871, Japan.
Keiichi YamaguchiInstitute for Protein Research, Osaka University, Yamadaoka 3-2, Suita, Osaka, 565-0871, Japan.
Masatomo SoInstitute for Protein Research, Osaka University, Yamadaoka 3-2, Suita, Osaka, 565-0871, Japan.ORCID 0000-0002-4815-4995
Keisuke YuzuDepartment of Chemistry, Graduate School of Science, Kobe University, Hyogo, 657-8501, Japan.
Eri ChataniDepartment of Chemistry, Graduate School of Science, Kobe University, Hyogo, 657-8501, Japan.
Yoko Akazawa-OgawaNational Institute of Advanced Industrial Science and Technology (AIST), 1-8-31 Midorigaoka, Ikeda, Osaka, 563-8577, Japan.
Yoshihisa HagiharaNational Institute of Advanced Industrial Science and Technology (AIST), 1-8-31 Midorigaoka, Ikeda, Osaka, 563-8577, Japan.
Yasushi KawataDepartment of Chemistry and Biotechnology, Graduate School of Engineering, Tottori University, Tottori, 680-8552, Japan.
Kensuke IkenakaDepartment of Neurology, Graduate School of Medicine, Osaka University, Yamadaoka 2-2, Suita, Osaka, 565-0871, Japan.
Hideki MochizukiDepartment of Neurology, Graduate School of Medicine, Osaka University, Yamadaoka 2-2, Suita, Osaka, 565-0871, Japan.
József KardosELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Eötvös Loránd University, Pázmány P. sétány 1/C, Budapest, 1117, Hungary.
Daniel E OtzenInterdisciplinary Nanoscience Center (iNANO), Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 14, DK-8000, Aarhus C, Denmark.ORCID 0000-0002-2918-8989
Vittorio BellottiNational Amyloidosis Centre, Centre for Amyloidosis and Acute Phase Proteins, University College London, London, NW3 2PF, UK.ORCID 0000-0002-0467-864X
Johannes BuchnerCenter for Integrated Protein Science at the Department Chemie, Technische Universität München, Lichtenbergstrasse 4, D-85747, Garching, Germany.ORCID 0000-0003-1282-7737
Yuji GotoInstitute for Protein Research, Osaka University, Yamadaoka 3-2, Suita, Osaka, 565-0871, Japan. gtyj8126@protein.osaka-u.ac.jp.ORCID 0000-0003-1221-1270

Funding

Medical Research Council MR/K000187/1Medical Research Council MR/R016984/1
6 · The paper itself

Abstract

The thermodynamic hypothesis of protein folding, known as the "Anfinsen's dogma" states that the native structure of a protein represents a free energy minimum determined by the amino acid sequence. However, inconsistent with the Anfinsen's dogma, globular proteins can misfold to form amyloid fibrils, which are ordered aggregates associated with diseases such as Alzheimer's and Parkinson's diseases. Here, we present a general concept for the link between folding and misfolding. We tested the accessibility of the amyloid state for various proteins upon heating and agitation. Many of them showed Anfinsen-like reversible unfolding upon heating, but formed amyloid fibrils upon agitation at high temperatures. We show that folding and amyloid formation are separated by the supersaturation barrier of a protein. Its breakdown is required to shift the protein to the amyloid pathway. Thus, the breakdown of supersaturation links the Anfinsen's intramolecular folding universe and the intermolecular misfolding universe.

Indexed as

Protein Foldingalpha-SynucleinAmino Acid SequenceAmyloidAmyloidosisChemical PrecipitationDNA-Binding ProteinsHumansIntrinsically Disordered ProteinsIslet Amyloid PolypeptideOsmolar ConcentrationProtein Aggregation, PathologicalProtein ConformationProtein Multimerizationtau ProteinsThermodynamicsalpha-SynucleinAmyloidDNA-Binding ProteinsIntrinsically Disordered ProteinsIslet Amyloid PolypeptideTARDBP protein, humantau Proteins

Identifiers

PMID33500517
PMCPMC7838177

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.