Evidence map›Paper›PMID 33500436›Full record

ArticleScientific reports2021

Using machine learning improves predictions of herd-level bovine tuberculosis breakdowns in Great Britain.

K Stański, S Lycett, T Porphyre, B M de C Bronsvoort

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Field-oriented assessment of bovine tuberculosis in Tunisian cattle: IDR, PCRWorld journal of microbiology & biotechnology · 2025
    Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Will we ever eradicate animal tuberculosis?Irish veterinary journal · 2023
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

K StańskiThe Epidemiology, Economics and Risk Assessment (EERA) Group, The Roslin Institute, Royal (Dick) School of Veterinary Studies, The University of Edinburgh, Easter Bush, Midlothian, UK. kajetan.stanski@ed.ac.uk.
S LycettThe Epidemiology, Economics and Risk Assessment (EERA) Group, The Roslin Institute, Royal (Dick) School of Veterinary Studies, The University of Edinburgh, Easter Bush, Midlothian, UK.
T PorphyreThe Epidemiology, Economics and Risk Assessment (EERA) Group, The Roslin Institute, Royal (Dick) School of Veterinary Studies, The University of Edinburgh, Easter Bush, Midlothian, UK.
B M de C BronsvoortThe Epidemiology, Economics and Risk Assessment (EERA) Group, The Roslin Institute, Royal (Dick) School of Veterinary Studies, The University of Edinburgh, Easter Bush, Midlothian, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/J004235/1
6 · The paper itself

Abstract

In the United Kingdom, despite decades of control efforts, bovine tuberculosis (bTB) has not been controlled and currently costs ~ £100 m annually. Critical in the failure of control efforts has been the lack of a sufficiently sensitive diagnostic test. Here we use machine learning (ML) to predict herd-level bTB breakdowns in Great Britain (GB) with the aim of improving herd-level diagnostic sensitivity. The results of routinely-collected herd-level tests were correlated with risk factor data. Four ML methods were independently trained with data from 2012-2014 including ~ 4700 positive herd-level test results annually. The best model's performance was compared to the observed sensitivity and specificity of the herd-level test calculated on the 2015 data resulting in an increased herd-level sensitivity from 61.3 to 67.6% (95% confidence interval (CI): 66.4-68.8%) and herd-level specificity from 90.5 to 92.3% (95% CI: 91.6-93.1%). This approach can improve predictive capability for herd-level bTB and support disease control.

Indexed as

Machine LearningAlgorithmsAnimalsCattleFarmsGeographyROC CurveTuberculin TestTuberculosis, BovineUnited Kingdom

Identifiers

PMID33500436
PMCPMC7838174

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.