Evidence map›Paper›PMID 33500331›Full record

ArticlemSystems2021

Pangenome Analytics Reveal Two-Component Systems as Conserved Targets in ESKAPEE Pathogens.

Akanksha Rajput, Yara Seif, Kumari Sonal Choudhary, Christopher Dalldorf, Saugat Poudel, Jonathan M Monk, Bernhard O Palsson

Abstract read
In one paragraph

Article in mSystems, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Small Molecules from Medicinal PlantMolecules (Basel, Switzerland) · 2025
    Article
  6. Article
  7. The mobilome landscape of biocide-resistance in Brazilian ESKAPE isolates.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  8. Article
  9. Evaluation of Expanded 2-Aminobenzothiazole Library for Inhibition ofbioRxiv : the preprint server for biology · 2024
    Article
  10. Engineered endolysin ofFrontiers in microbiology · 2024
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Microbial Genomics: Innovative Targets and Mechanisms.Antibiotics (Basel, Switzerland) · 2023
    Review
  17. Review
  18. Article
  19. Review
  20. The ArcAB Two-Component System: Function in Metabolism, Redox Control, and Infection.Microbiology and molecular biology reviews : MMBR · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Akanksha RajputSystems Biology Research Group, Department of Bioengineering, University of California, San Diego, San Diego, California, USA.ORCID https://orcid.org/0000-0001-8176-6697
Yara SeifSystems Biology Research Group, Department of Bioengineering, University of California, San Diego, San Diego, California, USA.ORCID https://orcid.org/0000-0001-8813-5679
Kumari Sonal ChoudharySystems Biology Research Group, Department of Bioengineering, University of California, San Diego, San Diego, California, USA.ORCID https://orcid.org/0000-0001-9527-7958
Christopher DalldorfSystems Biology Research Group, Department of Bioengineering, University of California, San Diego, San Diego, California, USA.
Saugat PoudelSystems Biology Research Group, Department of Bioengineering, University of California, San Diego, San Diego, California, USA.ORCID https://orcid.org/0000-0002-3732-2463
Jonathan M MonkSystems Biology Research Group, Department of Bioengineering, University of California, San Diego, San Diego, California, USA.ORCID https://orcid.org/0000-0002-3895-8949
Bernhard O PalssonSystems Biology Research Group, Department of Bioengineering, University of California, San Diego, San Diego, California, USA palsson@ucsd.edu.ORCID https://orcid.org/0000-0003-2357-6785

Funding

Systems Biology Approach to Redefine Susceptibility Testing and Treatment of MDR Pathogens in the Context of Host ImmunityU01AI124316 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PALSSON, BERNHARD O · 2016 to 2020
$10.2M
NIAID NIH HHS U01 AI124316
6 · The paper itself

Abstract

The two-component system (TCS) helps bacteria sense and respond to environmental stimuli through histidine kinases and response regulators. TCSs are the largest family of multistep signal transduction processes, and they are involved in many important cellular processes such as antibiotic resistance, pathogenicity, quorum sensing, osmotic stress, and biofilms. Here, we perform the first comprehensive study to highlight the role of TCSs as potential drug targets against ESKAPEE (

Indexed as

antibiotic resistanceESKAPEE pathogensgenomic architecturepangenomic analysistwo-component systems

Identifiers

PMID33500331
PMCPMC7842365

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.