Evidence map›Paper›PMID 33499129›Full record

ArticleInternational journal of molecular sciences2021

Identification of Novel lncRNAs in Ovarian Cancer and Their Impact on Overall Survival.

Nicholas Cardillo, Douglas Russo, Andreea Newtson, Henry Reyes, Yasmin Lyons, Eric Devor, David Bender, Michael J Goodheart, Jesus Gonzalez-Bosquet

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Nicholas CardilloDepartment of Obstetrics and Gynecology, University of Iowa Hospitals and Clinics, Iowa City, IA 52245, USA.
Douglas RussoDepartment of Obstetrics and Gynecology, University of Iowa Hospitals and Clinics, Iowa City, IA 52245, USA.
Andreea NewtsonDepartment of Obstetrics and Gynecology, University of Iowa Hospitals and Clinics, Iowa City, IA 52245, USA.ORCID 0000-0001-7591-2483
Henry ReyesDepartment of Gynecologic Oncology, University of Buffalo, Buffalo, NY 14203, USA.
Yasmin LyonsDepartment of Gynecologic Oncology, University of Texas-San Antonio, San Antonio, TX 78229, USA.
Eric DevorDepartment of Obstetrics and Gynecology, University of Iowa Hospitals and Clinics, Iowa City, IA 52245, USA.ORCID 0000-0001-7131-8604
David BenderDepartment of Obstetrics and Gynecology, University of Iowa Hospitals and Clinics, Iowa City, IA 52245, USA.
Michael J GoodheartDepartment of Obstetrics and Gynecology, University of Iowa Hospitals and Clinics, Iowa City, IA 52245, USA.
Jesus Gonzalez-BosquetDepartment of Obstetrics and Gynecology, University of Iowa Hospitals and Clinics, Iowa City, IA 52245, USA.ORCID 0000-0002-2079-4528
University of Iowa Hospitals and Clinics · USThe University of Texas at San Antonio · USUniversity at Buffalo, State University of New York · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Douglas Robert Spitz · 2000 to 2026
$70.0M
MTDH regulates Fanconi anemia repair pathway to mediate drug resistanceR01CA184101 · NCI · UNIVERSITY OF IOWA · PI LESLIE, KIMBERLY K., MENG, XIANGBING · 2014 to 2018
$1.6M
American Association of Obstetricians and Gynecologists Foundation Bridge Funding AwardDepartment of Obstetrics and Gynecology, University of Iowa Basic research fundNIH HHS R01 CA184101NIH HHS R01 CA99908
6 · The paper itself

Abstract

Long non-coding RNA's (lncRNA) are RNA sequences that do not encode proteins and are greater than 200 nucleotides in length. They regulate complex cellular mechanisms and have been associated with prognosis in various types of cancer. We aimed to identify lncRNA sequences that are associated with high grade serous ovarian cancer (HGSC) and assess their impact on overall survival. RNA was extracted from 112 HGSC patients and 12 normal fallopian tube samples from our Biobank tissue repository. RNA was sequenced and the Ultrafast and Comprehensive lncRNA detection and quantification pipeline (UClncR) was used for the identification of lncRNA sequences. Univariate logistic and multivariate lasso regression analyses identified lncRNA that was associated with HGSC. Univariate and multivariate Cox proportional hazard ratios were used to evaluate independent predictors of survival. 1943 of 16,325 investigated lncRNA's were differentially expressed in HGSC as compared to controls (

Indexed as

Antineoplastic AgentsBiological Specimen BanksBiomarkers, TumorCarcinoma, Ovarian EpithelialCase-Control StudiesFallopian TubesFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGenome, HumanGenomicsHumansKaplan-Meier EstimateMultivariate AnalysisOvarian NeoplasmsProportional Hazards ModelsAntineoplastic AgentsBiomarkers, TumorRNA, Long Noncodingchemotherapy responselong non-coding RNAovarian canceroverall survival

Identifiers

PMID33499129
PMCPMC7865736
OpenAlexW3123667289

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.