Evidence map›Paper›PMID 33497479›Full record

ArticleInternational journal of cancer2021

High prevalence of clonal hematopoiesis-type genomic abnormalities in cell-free DNA in invasive gliomas after treatment.

Ryosuke Okamura, David E Piccioni, Amélie Boichard, Suzanna Lee, Rebecca E Jimenez, Jason K Sicklick, Shumei Kato, Razelle Kurzrock

Open access · hybridAbstract read
In one paragraph

Article in International journal of cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  7. Revolutionising Cardio-Oncology Care with Precision Genomics.International journal of molecular sciences · 2025
    Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. The coming of age of liquid biopsy in neuro-oncology.Brain : a journal of neurology · 2023
    Article
  16. Review
  17. Article
  18. Cell-free DNA-based liquid biopsies in neurology.Brain : a journal of neurology · 2023
    Review
  19. Review
  20. Cancer: slaying the nine-headed Hydra.Annals of oncology : official journal of the European Society for Medical Oncology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ryosuke OkamuraCenter for Personalized Cancer Therapy, UC San Diego Moores Cancer Center, La Jolla, California, USA.ORCID 0000-0001-7352-8621
David E PiccioniCenter for Personalized Cancer Therapy, UC San Diego Moores Cancer Center, La Jolla, California, USA.
Amélie BoichardCenter for Personalized Cancer Therapy, UC San Diego Moores Cancer Center, La Jolla, California, USA.
Suzanna LeeCenter for Personalized Cancer Therapy, UC San Diego Moores Cancer Center, La Jolla, California, USA.
Rebecca E JimenezCenter for Personalized Cancer Therapy, UC San Diego Moores Cancer Center, La Jolla, California, USA.
Jason K SicklickCenter for Personalized Cancer Therapy, UC San Diego Moores Cancer Center, La Jolla, California, USA.ORCID 0000-0003-4403-0271
Shumei KatoCenter for Personalized Cancer Therapy, UC San Diego Moores Cancer Center, La Jolla, California, USA.ORCID 0000-0003-1193-1815
Razelle KurzrockCenter for Personalized Cancer Therapy, UC San Diego Moores Cancer Center, La Jolla, California, USA.ORCID 0000-0003-4110-1214
University of California San Diego · USUC San Diego Health System · US

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Jesse Nodora · 1985 to 2026
$124.9M
NCI NIH HHS P30 CA023100
6 · The paper itself

Abstract

Plasma cell-free DNA (cfDNA) is emerging as an important diagnostic tool in cancer. However, cfDNA alterations may differ from those in tissue and sometimes may reflect processes unrelated to the cancer, including clonal hematopoiesis (CH). We examined plasma cfDNA, tested by next-generation sequencing (NGS), for characterized alterations (excluding variants of unknown significance) in 135 patients with invasive glioma. Overall, 21% (28/135) had ≥1 alteration; 17% (23/135) had CH-type cfDNA mutations. Temozolomide (a mutagenic alkylating agent) with concurrent radiation therapy prior to blood draw was significantly associated with an increase in CH-type mutations, even after age, race/ethnicity, and WHO-grade were considered as confounders (odds ratio [95% confidence interval, CI] 8.98 [1.13-71.46]; P = .04; multivariable analysis). Further, of 18 patients with invasive glioma who had both cfDNA and tissue DNA NGS and had ≥1 cfDNA alteration, 16 (89%) had ≥1 cfDNA alteration not found in their tissue DNA, including CH-type alterations in genes such as TP53 (most common), ATM, GNAS, and JAK2. Altogether, 87% of cfDNA alterations (20/23) observed in the 18 patients were implicated in CH. Finally, examining all 135 patients, CH-type cfDNA mutations were an independent prognostic factor for shorter survival (hazard ratio [95% CI] 3.28 [1.28-8.40]; P = .01). These findings emphasize that not all characterized cfDNA alterations detected in patients with solid tumors are cancer-related. Importantly, in patients with invasive gliomas who have had prior temozolomide and radiation, CH-related alterations in cfDNA are frequent and correlate with poor outcomes.

Indexed as

MutationAdultAgedAged, 80 and overBrain NeoplasmsCell-Free Nucleic AcidsChemoradiotherapyClonal HematopoiesisDNA, NeoplasmGliomaHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedPrognosisSequence Analysis, DNACell-Free Nucleic AcidsDNA, NeoplasmTemozolomidecell-free DNACHclonal hematopoiesisglioblastoma multiformegliomaliquid biopsymolecular profiling

Identifiers

PMID33497479
PMCPMC8048515
OpenAlexW3125636797

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.