Evidence map›Paper›PMID 33497383›Full record

ArticlePLoS computational biology2021

Physical constraints on early blastomere packings.

James Giammona, Otger Campàs

Abstract read
In one paragraph

Article in PLoS computational biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Marine Model Organisms for Mechanobiology Studies.Results and problems in cell differentiation · 2026
    Review
  2. Collective effects of cell cleavage dynamics.Frontiers in cell and developmental biology · 2024
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Delineating the mechanisms and design principles ofComputational and structural biotechnology journal · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

James GiammonaCalifornia NanoSystems Institute, University of California, Santa Barbara, California, United States of America.ORCID 0000-0003-2381-7630
Otger CampàsCalifornia NanoSystems Institute, University of California, Santa Barbara, California, United States of America.ORCID 0000-0002-9642-8030

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

At very early embryonic stages, when embryos are composed of just a few cells, establishing the correct packing arrangements (contacts) between cells is essential for the proper development of the organism. As early as the 4-cell stage, the observed cellular packings in different species are distinct and, in many cases, differ from the equilibrium packings expected for simple adherent and deformable particles. It is unclear what are the specific roles that different physical parameters, such as the forces between blastomeres, their division times, orientation of cell division and embryonic confinement, play in the control of these packing configurations. Here we simulate the non-equilibrium dynamics of cells in early embryos and systematically study how these different parameters affect embryonic packings at the 4-cell stage. In the absence of embryo confinement, we find that cellular packings are not robust, with multiple packing configurations simultaneously possible and very sensitive to parameter changes. Our results indicate that the geometry of the embryo confinement determines the packing configurations at the 4-cell stage, removing degeneracy in the possible packing configurations and overriding division rules in most cases. Overall, these results indicate that physical confinement of the embryo is essential to robustly specify proper cellular arrangements at very early developmental stages.

Indexed as

BlastomeresAnimalsBiomechanical PhenomenaCaenorhabditis elegansCell CommunicationCell DivisionComputational BiologyEmbryonic DevelopmentMiceModels, BiologicalSea Urchins

Identifiers

PMID33497383
PMCPMC7864451

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.