Evidence map›Paper›PMID 33496264›Full record

ArticleeLife2021

Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments.

Bercem Dutagaci, Grzegorz Nawrocki, Joyce Goodluck, Ali Akbar Ashkarran, Charles G Hoogstraten, Lisa J Lapidus, Michael Feig

Abstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Review
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  6. Theory for sequence selection via phase separation and oligomerization.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Article
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  12. Macromolecular interactions and geometrical confinement determine the 3D diffusion of ribosome-sized particles in liveProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  14. Review
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  20. One bead per residue can describe all-atom protein structures.Structure (London, England : 1993) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bercem DutagaciDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, United States.ORCID 0000-0003-0333-5757
Grzegorz NawrockiDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, United States.
Joyce GoodluckDepartment of Physics, Michigan State University, East Lansing, United States.
Ali Akbar AshkarranPrecision Health Program and Department of Radiology, Michigan State University, East Lansing, United States.
Charles G HoogstratenDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, United States.
Lisa J LapidusDepartment of Physics, Michigan State University, East Lansing, United States.
Michael FeigDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, United States.ORCID 0000-0001-9380-6422

Funding

Modeling and dynamics of biomolecules on cellular scalesR35GM126948 · NIGMS · MICHIGAN STATE UNIVERSITY · PI Michael Feig · 2018 to 2026
$3.2M
NIGMS NIH HHS R35 GM126948
6 · The paper itself

Abstract

Phase separation processes are increasingly being recognized as important organizing mechanisms of biological macromolecules in cellular environments. Well-established drivers of phase separation are multi-valency and intrinsic disorder. Here, we show that globular macromolecules may condense simply based on electrostatic complementarity. More specifically, phase separation of mixtures between RNA and positively charged proteins is described from a combination of multiscale computer simulations with microscopy and spectroscopy experiments. Phase diagrams were mapped out as a function of molecular concentrations in experiment and as a function of molecular size and temperature via simulations. The resulting condensates were found to retain at least some degree of internal dynamics varying as a function of the molecular composition. The results suggest a more general principle for phase separation that is based primarily on electrostatic complementarity without invoking polymer properties as in most previous studies. Simulation results furthermore suggest that such phase separation may occur widely in heterogenous cellular environment between nucleic acid and protein components.

Indexed as

CytoplasmMolecular Dynamics SimulationProteinsRNAProteinsRNAcoarse-grained modelingconfocal microscopyelectrostaticsFRET spectroscopyliquid-liquid phase separationNMR spectroscopynonephysics of living systems

Identifiers

PMID33496264
PMCPMC7877912

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.