Evidence map›Paper›PMID 33495529›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2021

CDK19-related disorder results from both loss-of-function and gain-of-function de novo missense variants.

Yuri A Zarate, Tomoko Uehara, Kota Abe, Masayuki Oginuma, Sora Harako, Shizuka Ishitani, Anna-Elina Lehesjoki, Tatjana Bierhals, Katja Kloth, Nadja Ehmke and 24 more

Abstract read
PubMed Publisher
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Heterozygous Med13l mice recapitulate a developmental growth delay and craniofacial anomalies seen in MED13L syndrome.Developmental dynamics : an official publication of the American Association of Anatomists · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Pathogenic mutation hotspots in protein kinase domain structure.Protein science : a publication of the Protein Society · 2023
    Article
  7. Genetically Engineered Mice Unveil In Vivo Roles of the Mediator Complex.International journal of molecular sciences · 2023
    Review
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

Yuri A ZarateSection of Genetics and Metabolism, University of Arkansas for Medical Sciences, Little Rock, AR, USA. yazarate@uams.edu.
Tomoko UeharaCenter for Medical Genetics, Keio University School of Medicine, Tokyo, Japan.
Kota AbeDepartment of Homeostatic Regulation, Division of Cellular and Molecular Biology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.
Masayuki OginumaDepartment of Homeostatic Regulation, Division of Cellular and Molecular Biology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.
Sora HarakoLaboratory of Gene Regulation, Graduate School of Medicine and Pharmaceutical Sciences, University of Toyama, Toyama, Japan.
Shizuka IshitaniDepartment of Homeostatic Regulation, Division of Cellular and Molecular Biology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.
Anna-Elina LehesjokiFolkhälsan Research Center and University of Helsinki, Helsinki, Finland.
Tatjana BierhalsInstitute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Katja KlothInstitute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Nadja EhmkeInstitute of Medical and Human Genetics, Charité - Universitätsmedizin Berlin, Berlin, Germany.
Denise HornInstitute of Medical and Human Genetics, Charité - Universitätsmedizin Berlin, Berlin, Germany.
Manuel HoltgreweCharité - Universitätsmedizin Berlin, Berlin, Germany.
Katherine AndersonDepartment of Pediatrics, University of Vermont Medical Center, Burlington, VT, USA.
David ViskochilDivision of Medical Genetics, Department of Pediatrics, University of Utah, Salt Lake City, UT, USA.
Courtney L Edgar-ZarateDepartment of Pediatrics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Maria J Guillen SacotoGeneDx, Gaithersburg, MD, USA.
Rhonda E SchnurGeneDx, Gaithersburg, MD, USA.
Michelle M MorrowGeneDx, Gaithersburg, MD, USA.
Amarilis Sanchez-ValleDivision of Genetics and Metabolism, Department of Pediatrics, University of South Florida, Tampa, FL, USA.
John PappasNYU Grossman School of Medicine, Dept of Pediatrics, Clinical Genetic Services, New York, NY, USA.
Rachel RabinNYU Grossman School of Medicine, Dept of Pediatrics, Clinical Genetic Services, New York, NY, USA.
Mikko MuonaFolkhälsan Research Center and University of Helsinki, Helsinki, Finland.
Anna-Kaisa AnttonenFolkhälsan Research Center and University of Helsinki, Helsinki, Finland.
Konrad PlatzerInstitute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany.
Johannes LuppeInstitute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany.
Janina Gburek-AugustatDivision of Neuropaediatrics, Hospital for Children and Adolescents, University Leipzig, Leipzig, Germany.
Tadashi KanameDepartment of Genome Medicine, National Center for Child Health and Developemt, Tokyo, Japan.
Nobuhiko OkamotoDepartment of Medical Genetics, Osaka Women's and Children's Hospital, Osaka, Japan.
Seiji MizunoDepartment of Clinical Genetics, Central Hospital, Aichi Developmental Disability Center, Aichi, Japan.
Yusaku KaidoLaboratory of Gene Regulation, Graduate School of Medicine and Pharmaceutical Sciences, University of Toyama, Toyama, Japan.
Yoshiaki OhkumaLaboratory of Gene Regulation, Graduate School of Medicine and Pharmaceutical Sciences, University of Toyama, Toyama, Japan.
Yutaka HiroseLaboratory of Gene Regulation, Graduate School of Medicine and Pharmaceutical Sciences, University of Toyama, Toyama, Japan.
Tohru IshitaniDepartment of Homeostatic Regulation, Division of Cellular and Molecular Biology, Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.
Kenjiro KosakiCenter for Medical Genetics, Keio University School of Medicine, Tokyo, Japan.

Funding

Utah Center for Clinical and Translational ScienceUL1TR002538 · NCATS · UNIVERSITY OF UTAH · PI HESS, RACHEL, MAJERSIK, JENNIFER JUHL · 2018 to 2022
$26.0M
NCATS NIH HHS UL1 TR002538
6 · The paper itself

Abstract

purposeTo expand the recent description of a new neurodevelopmental syndrome related to alterations in CDK19.

methodsIndividuals were identified through international collaboration. Functional studies included autophosphorylation assays for CDK19 Gly28Arg and Tyr32His variants and in vivo zebrafish assays of the CDK19

resultsWe describe 11 unrelated individuals (age range: 9 months to 14 years) with de novo missense variants mapped to the kinase domain of CDK19, including two recurrent changes at residues Tyr32 and Gly28. In vitro autophosphorylation and substrate phosphorylation assays revealed that kinase activity of protein was lower for p.Gly28Arg and higher for p.Tyr32His substitutions compared with that of the wild-type protein. Injection of CDK19 messenger RNA (mRNA) with either the Tyr32His or the Gly28Arg variants using in vivo zebrafish model significantly increased fraction of embryos with morphological abnormalities. Overall, the phenotype of the now 14 individuals with CDK19-related disorder includes universal developmental delay and facial dysmorphism, hypotonia (79%), seizures (64%), ophthalmologic anomalies (64%), and autism/autistic traits (56%).

conclusionCDK19 de novo missense variants are responsible for a novel neurodevelopmental disorder. Both kinase assay and zebrafish experiments showed that the pathogenetic mechanism may be more diverse than previously thought.

Indexed as

Intellectual DisabilityNeurodevelopmental DisordersAnimalsCyclin-Dependent KinasesGain of Function MutationHumansInfantMutation, MissenseZebrafishCDK19 protein, humanCyclin-Dependent Kinases

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.