Evidence map›Paper›PMID 33494189›Full record

ArticleGenes2021

Linked-Read Whole Genome Sequencing Solves a Double

Maria Elena Onore, Annalaura Torella, Francesco Musacchia, Paola D'Ambrosio, Mariateresa Zanobio, Francesca Del Vecchio Blanco, Giulio Piluso, Vincenzo Nigro

Abstract read
In one paragraph

Article in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Maria Elena OnoreUOSID Genetica Medica e Cardiomiologia, Dipartimento di Medicina di Precisione, Università degli Studi della Campania "Luigi Vanvitelli", 80138 Napoli, Italy.
Annalaura TorellaUOSID Genetica Medica e Cardiomiologia, Dipartimento di Medicina di Precisione, Università degli Studi della Campania "Luigi Vanvitelli", 80138 Napoli, Italy.
Francesco MusacchiaTelethon Institute of Genetics and Medicine, 80078 Pozzuoli, Italy.ORCID 0000-0001-9440-1080
Paola D'AmbrosioUOSID Genetica Medica e Cardiomiologia, Dipartimento di Medicina di Precisione, Università degli Studi della Campania "Luigi Vanvitelli", 80138 Napoli, Italy.
Mariateresa ZanobioUOSID Genetica Medica e Cardiomiologia, Dipartimento di Medicina di Precisione, Università degli Studi della Campania "Luigi Vanvitelli", 80138 Napoli, Italy.ORCID 0000-0002-3750-1592
Francesca Del Vecchio BlancoUOSID Genetica Medica e Cardiomiologia, Dipartimento di Medicina di Precisione, Università degli Studi della Campania "Luigi Vanvitelli", 80138 Napoli, Italy.ORCID 0000-0002-9454-2964
Giulio PilusoUOSID Genetica Medica e Cardiomiologia, Dipartimento di Medicina di Precisione, Università degli Studi della Campania "Luigi Vanvitelli", 80138 Napoli, Italy.ORCID 0000-0001-9418-125X
Vincenzo NigroUOSID Genetica Medica e Cardiomiologia, Dipartimento di Medicina di Precisione, Università degli Studi della Campania "Luigi Vanvitelli", 80138 Napoli, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Next generation sequencing (NGS) has changed our approach to diagnosis of genetic disorders. Nowadays, the most comprehensive application of NGS is whole genome sequencing (WGS) that is able to detect virtually all DNA variations. However, even after accurate WGS, many genetic conditions remain unsolved. This may be due to the current NGS protocols, based on DNA fragmentation and short reads. To overcome these limitations, we applied a linked-read sequencing technology that combines single-molecule barcoding with short-read WGS. We were able to assemble haplotypes and distinguish between alleles along the genome. As an exemplary case, we studied the case of a female carrier of X-linked muscular dystrophy with an unsolved genetic status. A deletion of exons 16-29 in

Indexed as

Gene RearrangementWhole Genome SequencingChildComparative Genomic HybridizationDystrophinGenetic Association StudiesGenetic Predisposition to DiseaseHumansMaleMuscular Dystrophy, DuchenneMutationPedigreePolymorphism, Single NucleotideDMD protein, humanDystrophin10× GenomicsDMD genelinked-read WGSmuscular dystrophyundiagnosed diseases

Identifiers

PMID33494189
PMCPMC7909759

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.