Evidence map›Paper›PMID 33492497›Full record

ArticlePlant cell reports2021

Arabidopsis TCX8 functions as a senescence modulator by regulating LOX2 expression.

Minsoo Noh, Jin Seok Shin, Jong Chan Hong, Soo Youn Kim, Jeong Sheop Shin

Abstract read
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In one paragraph

Article in Plant cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Interactome of Arabidopsis Thaliana.Plants (Basel, Switzerland) · 2022
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Minsoo NohDivision of Life Sciences, Korea University, Seoul, 02841, Republic of Korea.ORCID http://orcid.org/0000-0002-1239-3783
Jin Seok ShinDivision of Life Sciences, Korea University, Seoul, 02841, Republic of Korea.ORCID http://orcid.org/0000-0002-3617-7954
Jong Chan HongDivision of Life Science, Applied Life Science (BK21 Plus Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, Gyeongnam, 52828, Republic of Korea.ORCID http://orcid.org/0000-0002-7036-813X
Soo Youn KimBionics Corporation, Seoul, 04778, Republic of Korea. sykim@bionicsro.co.kr.ORCID http://orcid.org/0000-0002-4498-4799
Jeong Sheop ShinDivision of Life Sciences, Korea University, Seoul, 02841, Republic of Korea. jsshin@korea.ac.kr.ORCID http://orcid.org/0000-0002-5944-4947

Funding

National Research Foundation of Korea 2019R1F1A1060014National Research Foundation of Korea 2020R1A6A1A03044344Rural Development Administration PJ01367001
6 · The paper itself

Abstract

key messageTCX8 localizes to nucleus and has transcriptional repression activity. TCX8 binds to the promoter region of LOX2 encoding lipoxygenase, causing JA biosynthesis suppression, and thereby delays plant senescence. Conserved CXC domain-containing proteins are found in most eukaryotes. Eight TCX proteins, which are homologs of animal CXC-Hinge-CXC (CHC) proteins, were identified in Arabidopsis, and three of them, TSO1, TCX2/SOL2 and TCX3/SOL1, have been reported to affect cell-cycle control. TCX8, one of the TCX family proteins, was believed to be a TF but its precise function has not been reported. Yeast two-hybrid screening revealed TCP20, a TF that binds to the promoter of LOX2 encoding lipoxygenase, as a strong candidate for interaction with TCX8. We confirmed that TCX8 directly interacts with TCP20 using in vitro pull-down assay and in vivo BiFC and observed that TCX8, as a TF, localizes to nucleus. Using EMSA and by analyzing phenotypes of TCX8-overexpression lines, we demonstrated that TCX8 regulates the expression of LOX2 by binding to either cis-element of LOX2 promoter to which TCP20 or TCP4 binds, affecting JA biosynthesis, and thereby delaying plant senescence. Our study provides new information about the role of TCX8 in modulating plant senescence through regulating LOX2 expression.

Indexed as

ArabidopsisArabidopsis ProteinsBinding SitesCell NucleusGene Expression Regulation, PlantLipoxygenasesPlants, Genetically ModifiedPromoter Regions, GeneticProtein Interaction MapsTranscription FactorsTwo-Hybrid System TechniquesArabidopsis Proteinslipoxygenase 2, ArabidopsisLipoxygenasesTCP20 protein, ArabidopsisTCP4 protein, ArabidopsisTranscription FactorsArabidopsis thalianaLOX2SenescenceTCP20TCP4TCX8

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.