Evidence map›Paper›PMID 33490652›Full record

ArticleBiochemistry and biophysics reports2021

Notch and TNF-α signaling promote cytoplasmic accumulation of OLFM4 in intestinal epithelium cells and exhibit a cell protective role in the inflamed mucosa of IBD patients.

Reiko Kuno, Go Ito, Ami Kawamoto, Yui Hiraguri, Hady Yuki Sugihara, Sayaka Takeoka, Sayaka Nagata, Junichi Takahashi, Mao Tsuchiya, Sho Anzai and 7 more

Open access · goldAbstract read
In one paragraph

Article in Biochemistry and biophysics reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Reiko KunoDepartment of Gastroenterology and Hepatology, Japan.
Go ItoAdvanced Research Institute, Tokyo Medical and Dental University (TMDU), Tokyo, Japan.
Ami KawamotoDepartment of Gastroenterology and Hepatology, Japan.
Yui HiraguriDepartment of Gastroenterology and Hepatology, Japan.
Hady Yuki SugiharaDepartment of Gastroenterology and Hepatology, Japan.
Sayaka TakeokaDepartment of Gastroenterology and Hepatology, Japan.
Sayaka NagataDepartment of Gastroenterology and Hepatology, Japan.
Junichi TakahashiDepartment of Gastroenterology and Hepatology, Japan.
Mao TsuchiyaDepartment of Gastroenterology and Hepatology, Japan.
Sho AnzaiDepartment of Gastroenterology and Hepatology, Japan.
Tomohiro MizutaniDepartment of Gastroenterology and Hepatology, Japan.
Hiromichi ShimizuCenter for Stem Cell and Regenerative Medicine, Tokyo Medical and Dental University (TMDU), Tokyo, Japan.
Shiro YuiCenter for Stem Cell and Regenerative Medicine, Tokyo Medical and Dental University (TMDU), Tokyo, Japan.
Shigeru OshimaDepartment of Gastroenterology and Hepatology, Japan.
Kiichiro TsuchiyaDepartment of Gastroenterology and Hepatology, Japan.
Mamoru WatanabeAdvanced Research Institute, Tokyo Medical and Dental University (TMDU), Tokyo, Japan.
Ryuichi OkamotoDepartment of Gastroenterology and Hepatology, Japan.
Tokyo Medical and Dental University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Notch signaling is activated in the intestinal epithelial cells (IECs) of patients with inflammatory bowel disease (IBD), and contributes to mucosal regeneration. Our previous study indicated that TNF-α and Notch signaling may synergistically promote the expression of the intestinal stem cell (ISC) marker OLFM4 in human IECs. In the present study, we investigated the gene regulation and function of OLFM4 in human IEC lines. We confirmed that TNF-α and Notch synergistically upregulate the mRNA expression of OLFM4. Luciferase reporter assay showed that OLFM4 transcription is regulated by the synergy of TNF-α and Notch. At the protein level, synergy between TNF-α and Notch promoted cytoplasmic accumulation of OLFM4, which has potential anti-apoptotic properties in human IECs. Analysis of patient-derived tissues and organoids consistently showed cytoplasmic accumulation of OLFM4 in response to NF-κB and Notch activation. Cytoplasmic accumulation of OLFM4 in human IECs is tightly regulated by Notch and TNF-α in synergy. Such cytoplasmic accumulation of OLFM4 may have a cell-protective role in the inflamed mucosa of patients with IBD.

Indexed as

CD, Crohn's diseaseChIP, chromatin immunoprecipitationDBZ, intestinal epithelial cellsDox, doxycyclineIBD, inflammatory bowel diseaseIEC, dibenzazepineNICD, Notch intracellular domainNotch pathwayOLFM4qRT-PCR, quantitative reverse transcription-polymerase chain reaction analysisTNF-α, tumour necrosis factor αTumour necrosis factor-α (TNF-α)UC, ulcerative colitis

Identifiers

PMID33490652
PMCPMC7808948
OpenAlexW3119580280

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.