Evidence map›Paper›PMID 33485964›Full record

ArticleThe Journal of biological chemistry

Structural characterization of HIV-1 matrix mutants implicated in envelope incorporation.

Gunnar N Eastep, Ruba H Ghanam, Todd J Green, Jamil S Saad

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Atomic view of the HIV-1 matrix lattice; implications on virus assembly and envelope incorporation.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Gunnar N EastepDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Ruba H GhanamDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Todd J GreenDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Jamil S SaadDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA. Electronic address: saad@uab.edu.
University of Alabama at Birmingham · US

Funding

XRAY CRYSTALLOGRAPHYP30CA013148 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Omer Jamy · 1985 to 2026
$165.9M
Structural basis for HIV-1 Gag interactions with cellular and viral constituentsR01AI150901 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Terje Dokland · 2019 to 2026
$2.9M
Structural Basis for HIV-1 Gag Interactions with Cellular ConstituentsR01GM117837 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SAAD, JAMIL SUBHI · 2015 to 2018
$1.7M
MicroCal Auto-iTC200; automated high sensitivity isothermal titration calorimetryS10RR026478 · NCRR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BROUILLETTE, CHRISTIE G. · 2010 to 2010
$250k
NCI NIH HHS P30 CA013148NCRR NIH HHS S10 RR026478NIAID NIH HHS R01 AI150901NIGMS NIH HHS R01 GM117837
6 · The paper itself

Abstract

During the late phase of HIV-1 infection, viral Gag polyproteins are targeted to the plasma membrane (PM) for assembly. Gag localization at the PM is a prerequisite for the incorporation of the envelope protein (Env) into budding particles. Gag assembly and Env incorporation are mediated by the N-terminal myristoylated matrix (MA) domain of Gag. Nonconservative mutations in the trimer interface of MA (A45E, T70R, and L75G) were found to impair Env incorporation and infectivity, leading to the hypothesis that MA trimerization is an obligatory step for Env incorporation. Conversely, Env incorporation can be rescued by a compensatory mutation in the MA trimer interface (Q63R). The impact of these MA mutations on the structure and trimerization properties of MA is not known. In this study, we employed NMR spectroscopy, X-ray crystallography, and sedimentation techniques to characterize the structure and trimerization properties of HIV-1 MA A45E, Q63R, T70R, and L75G mutant proteins. NMR data revealed that these point mutations did not alter the overall structure and folding of MA but caused minor structural perturbations in the trimer interface. Analytical ultracentrifugation data indicated that mutations had a minimal effect on the MA monomer-trimer equilibrium. The high-resolution X-ray structure of the unmyristoylated MA Q63R protein revealed hydrogen bonding between the side chains of adjacent Arg-63 and Ser-67 on neighboring MA molecules, providing the first structural evidence for an additional intermolecular interaction in the trimer interface. These findings advance our knowledge of the interplay of MA trimerization and Env incorporation into HIV-1 particles.

Indexed as

Cell MembraneGene Products, gagHIV-1HIV InfectionsHumansMutationProtein BindingProtein MultimerizationViral Matrix ProteinsVirionVirus AssemblyVirus ReplicationGene Products, gagViral Matrix Proteinsenvelope protein (Env)Gag polyproteingp41 cytoplasmic tail (gp41CT)human immunodeficiency virus type 1 (HIV-1)myristoylated matrix (MA)nuclear magnetic resonance (NMR)phosphatidylinositol 4,5-bisphosphate (PI(4,5)P(2))plasma membrane (PM)virus assemblyX-ray crystallography

Identifiers

PMID33485964
PMCPMC7952133
OpenAlexW3122644100

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.