Evidence map›Paper›PMID 33482727›Full record

ArticleBMC plant biology2021

Transcriptional and proteomic insights into phytotoxic activity of interspecific potato hybrids with low glycoalkaloid contents.

Katarzyna Szajko, Jarosław Ciekot, Iwona Wasilewicz-Flis, Waldemar Marczewski, Dorota Sołtys-Kalina

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Katarzyna SzajkoPlant Breeding and Acclimatization Institute, Młochów Research Centre, Platanowa 19 st, 05-831, Młochów, Poland.
Jarosław CiekotLudwik Hirszfeld Institute of Immunology and Experimental Therapy, Laboratory of Biomedical Chemistry, Rudolfa Weigla 12 st, 53-114, Wrocław, Poland.
Iwona Wasilewicz-FlisPlant Breeding and Acclimatization Institute, Młochów Research Centre, Platanowa 19 st, 05-831, Młochów, Poland.
Waldemar MarczewskiPlant Breeding and Acclimatization Institute, Młochów Research Centre, Platanowa 19 st, 05-831, Młochów, Poland.
Dorota Sołtys-KalinaPlant Breeding and Acclimatization Institute, Młochów Research Centre, Platanowa 19 st, 05-831, Młochów, Poland. d.soltys@ihar.edu.pl.ORCID http://orcid.org/0000-0002-7072-7630
Plant Breeding and Acclimatization Institute - National Research Institute · PLLudwik Hirszfeld Institute of Immunology and Experimental Therapy · PL

Funding

Narodowym Centrum Nauki UMO-2016/23/D/NZ9/02672
6 · The paper itself

Abstract

backgroundGlycoalkaloids are bioactive compounds that contribute to the defence response of plants against herbivore attack and during pathogenesis. Solanaceous plants, including cultivated and wild potato species, are sources of steroidal glycoalkaloids. Solanum plants differ in the content and composition of glycoalkaloids in organs. In wild and cultivated potato species, more than 50 steroidal glycoalkaloids were recognized. Steroidal glycoalkaloids are recognized as potential allelopathic/phytotoxic compounds that may modify the growth of target plants. There are limited data on the impact of the composition of glycoalkaloids on their phytotoxic potential.

resultsThe presence of α-solasonine and α-solamargine in potato leaf extracts corresponded to the high phytotoxic potential of the extracts. Among the differentially expressed genes between potato leaf bulks with high and low phytotoxic potential, the most upregulated transcripts in sample of high phytotoxic potential were anthocyanin 5-aromatic acyltransferase-like and subtilisin-like protease SBT1.7-transcript variant X2. The most downregulated genes were carbonic anhydrase chloroplastic-like and miraculin-like. An analysis of differentially expressed proteins revealed that the most abundant group of proteins were those related to stress and defence, including glucan endo-1,3-beta-glucosidase acidic isoform, whose expression level was 47.96× higher in potato leaf extract with low phytotoxic.

conclusionsThe phytotoxic potential of potato leaf extract possessing low glycoalkaloid content is determined by the specific composition of these compounds in leaf extract, where α-solasonine and α-solamargine may play significant roles. Differentially expressed gene and protein profiles did not correspond to the glycoalkaloid biosynthesis pathway in the expression of phytotoxic potential. We cannot exclude the possibility that the phytotoxic potential is influenced by other compounds that act antagonistically or may diminish the glycoalkaloids effect.

Indexed as

ProteomeTranscriptomeChimeraGene Expression ProfilingPhytochemicalsPlant ExtractsPlant LeavesProteomicsSolanaceous AlkaloidsSolanumToxins, Biologicalalpha-solamarginePhytochemicalsPlant ExtractsProteomeSolanaceous AlkaloidsToxins, BiologicalAllelopathyDiploid hybridGlucan endo-1,3-beta-glucosidaseLeptine IISolamargineSolanum chacoenseSolanum tuberosumSolasonineThreonine deaminase

Identifiers

PMID33482727
PMCPMC7825178
OpenAlexW3121873626

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.