Evidence map›Paper›PMID 33481949›Full record

ArticlePloS one2021

Survey of five major grapevine viruses infecting Blatina and Žilavka cultivars in Bosnia and Herzegovina.

Ana Crnogorac, Stefano Panno, Ana Mandić, Mladen Gašpar, Andrea Giovanni Caruso, Emanuela Noris, Salvatore Davino, Slavica Matić

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Ana CrnogoracFederal Agromediterranean Institute of Mostar, Mostar, Bosnia and Herzegovina.
Stefano PannoDepartment of Agricultural, Food and Forest Sciences, University of Palermo, Palermo, Italy.
Ana MandićFaculty of Agriculture and Food Technology, University of Mostar, Mostar, Bosnia and Herzegovina.
Mladen GašparFederal Agromediterranean Institute of Mostar, Mostar, Bosnia and Herzegovina.
Andrea Giovanni CarusoDepartment of Agricultural, Food and Forest Sciences, University of Palermo, Palermo, Italy.
Emanuela NorisInstitute for Sustainable Plant Protection, National Research Council of Italy (IPSP-CNR), Torino, Italy.
Salvatore DavinoDepartment of Agricultural, Food and Forest Sciences, University of Palermo, Palermo, Italy.
Slavica MatićInstitute for Sustainable Plant Protection, National Research Council of Italy (IPSP-CNR), Torino, Italy.ORCID 0000-0002-0885-8744
Institute for Sustainable Plant Protection · ITUniversity of Mostar · BAUniversity of Palermo · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sanitary status of grapevines has not yet been considered sufficiently in vineyards throughout Bosnia and Herzegovina (BiH). An extensive survey of five major grapevine viruses in the country was carried out in 2019. A total of 630 samples from the two dominant autochthonous cultivars, named Žilavka and Blatina, were tested by DAS-ELISA for the presence of grapevine leafroll-associated viruses (GLRaV-1 and 3), grapevine fleck virus (GFkV), grapevine fanleaf virus (GFLV) and Arabis mosaic virus (ArMV). Eighty-eight % of the samples were positive for at least one virus, and all five viruses were detected, thought with different incidence, i.e. GLRaV-3 (84%), GFLV (43%), GLRaV-1 (14%), GFkV (10%) and ArMV (0.2%). The majority of infected plants (about 75%) were asymptomatic. Specific virus symptoms were observed in the remaining infected plants, together with the reported GLRaV vectors, Planococcus ficus and Parthenolecanium corni, while nematodes of the Xiphinema genus were not found in the GFLV- or ArMV-infected vineyards. The GLRaV-3 CP phylogenetic analyses showed 75-100% nucleotide identity between the BiH and reference isolates, and the BiH isolates clustered into the major group. The dNS/dS ratio indicated a negative selection of the virus population, and the lack of geographical structuring within the population was observed. In addition, putative GLRaV-3 recombinants with breakpoints in the 5' of the CP gene were detected, while no recombinant strains were identified for the other four viruses. The obtained results indicate a deteriorated sanitary status of the cultivated grapevines, the prevalence and intraspecies genetic diversity of GLRaV-3 throughout the country. The establishment of certified grapevine material and adequate virus vector control is therefore of primary importance to prevent further spread of these viruses. This study presents the results of the first molecular characterisation of grapevine viruses in Bosnia and Herzegovina.

Indexed as

Bosnia and HerzegovinaPhylogenyPlant DiseasesPlant VirusesRNA, ViralVitisRNA, Viral

Identifiers

PMID33481949
PMCPMC7822351
OpenAlexW3123420020

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.