Evidence map›Paper›PMID 33481830›Full record

ArticlePloS one2021

Methylation of the PTENP1 pseudogene as potential epigenetic marker of age-related changes in human endometrium.

Tatyana F Kovalenko, Ksenia V Morozova, Marat S Pavlyukov, Ksenia S Anufrieva, Mikhail Yu Bobrov, Alina M Gamisoniya, Lyudmila A Ozolinya, Yulia E Dobrokhotova, Mikhail I Shakhparonov, Lev I Patrushev

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Uterine Aging and Reproduction: Dealing with a Puzzle Biologic Topic.International journal of molecular sciences · 2023
    Review
  5. Review
  6. Cancers · 2023
    Review
  7. Review
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Tatyana F KovalenkoLaboratory of membrane bioenergetics, Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0001-6091-892X
Ksenia V MorozovaDepartment of Obstetrics and Gynecology, Pirogov Russian National Research Medical University, Moscow, Russia.
Marat S PavlyukovLaboratory of membrane bioenergetics, Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry Russian Academy of Sciences, Moscow, Russia.
Ksenia S AnufrievaCenter for Precision Genome Editing and Genetic Technologies for Biomedicine, Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia.
Mikhail Yu BobrovLaboratory of Molecular Pathophysiology, Kulakov Research Center of Obstetrics, Gynecology and Perinatology, Ministry of Healthcare of Russian Federation, Moscow, Russia.
Alina M GamisoniyaLaboratory of Molecular Pathophysiology, Kulakov Research Center of Obstetrics, Gynecology and Perinatology, Ministry of Healthcare of Russian Federation, Moscow, Russia.ORCID 0000-0001-8532-4714
Lyudmila A OzolinyaDepartment of Obstetrics and Gynecology, Pirogov Russian National Research Medical University, Moscow, Russia.
Yulia E DobrokhotovaDepartment of Obstetrics and Gynecology, Pirogov Russian National Research Medical University, Moscow, Russia.
Mikhail I ShakhparonovLaboratory of membrane bioenergetics, Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry Russian Academy of Sciences, Moscow, Russia.
Lev I PatrushevEducational & scientific center, Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry Russian Academy of Sciences, Moscow, Russia.
Institute of Bioorganic Chemistry · RUPirogov Russian National Research Medical University · RUMinistry of Health of the Russian Federation · RUMoscow Institute of Physics and Technology · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The processed pseudogene PTENP1 is involved in the regulation of the expression of the PTEN and acts as a tumor suppressor in many types of malignances. In our previous study we showed that PTENP1 methylation is present not only in tumor, but also in normal endometrium tissues of women over 45 years old. Here we used methylation-specific PCR to analyze methylation status of CpG island located near promoter region of PTENP1 in malignant and non-malignant endometrium tissues collected from 236 women of different age groups. To confirm our results, we also analyzed RNA sequencing and microarray data from 431 women with endometrial cancer from TCGA database. We demonstrated that methylation of PTENP1 is significantly increased in older patients. We also found an age-dependent increase in the level of PTENP1 expression in endometrial tissue. According to our data, PTENP1 methylation elevates the level of the pseudogene sense transcript. In turn, a high level of this transcript correlates with a more favorable prognosis in endometrial cancer. The data obtained suggested that PTENP1 methylation is associated with age-related changes in normal and hyperplastic endometrial tissues. We assumed that age-related increase in PTENP1 methylation and subsequent elevation of its expression may serve as a protective mechanism aimed to prevent malignant transformation of endometrial tissue in women during the perimenopause, menopause, and postmenopause periods.

Indexed as

Epigenesis, GeneticAdolescentAdultAgedAgingBiomarkersCell LineDNA MethylationEndometriumFemaleHumansKaplan-Meier EstimateMiddle AgedPseudogenesSurvival AnalysisYoung AdultBiomarkers

Identifiers

PMID33481830
PMCPMC7822536
OpenAlexW3125363940

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.