Evidence map›Paper›PMID 33481232›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2021

Detection of Plasma Membrane Phosphoinositide Dynamics Using Genetically Encoded Fluorescent Protein Probes.

Rebecca Cabral-Dias, Yasmin Awadeh, Roberto J Botelho, Costin N Antonescu

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Rebecca Cabral-DiasDepartment of Chemistry and Biology and the Graduate Program in Molecular Science, Ryerson University, Toronto, ON, Canada.
Yasmin AwadehDepartment of Chemistry and Biology and the Graduate Program in Molecular Science, Ryerson University, Toronto, ON, Canada.
Roberto J BotelhoDepartment of Chemistry and Biology and the Graduate Program in Molecular Science, Ryerson University, Toronto, ON, Canada.
Costin N AntonescuDepartment of Chemistry and Biology and the Graduate Program in Molecular Science, Ryerson University, Toronto, ON, Canada. cantonescu@ryerson.ca.
Toronto Metropolitan University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dynamic phosphorylation of phosphatidylinositol produces seven distinct but interconvertible phosphatidylinositol phosphates (PIPs). Each PIP exhibits specific enrichment in a subset of membrane compartments as a result of dynamic phosphorylation and dephosphorylation by lipid kinases and phosphatases, and/or by vesicle-mediated transport. Several PIPs are found within the plasma membrane, such as phosphatidylinositol-4-phosphate [PI(4)P], phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2], phosphatidylinositol-3,4-bisphosphate [PI(3,4)P2], and phosphatidylinositol-3,4,5-trisphosphate (PIP3), and these control many aspects of cell physiology, including receptor signaling and membrane traffic. As a result, measurement of the cell surface abundance of these PIPs is a valuable resource to allow understanding of the regulation and function of these cell surface lipids. Here, we describe methods based on quantification of the localization of genetically encoded fluorescent PIP probes to the cell surface by either spinning disc confocal microscopy or total internal reflection fluorescence microscopy that allow detection of changes in cell surface levels of PI(4,5)P2, PI(3,4)P2, and PIP3. These methods can also be applied to the measurement of other PIPs or lipid species at the cell surface, and thus represent a useful resource for the study of the cell biology of PIPs.

Indexed as

AnimalsBiosensing TechniquesCell Culture TechniquesCell MembraneFluorescent DyesHumansMicroscopy, FluorescencePhosphatidylinositol 3-KinasesPhosphatidylinositol PhosphatesPhosphatidylinositolsPhosphoric Monoester HydrolasesPhosphotransferasesProtein TransportFluorescent DyesPhosphatidylinositol 3-Kinasesphosphatidylinositol 4-phosphatePhosphatidylinositol PhosphatesPhosphatidylinositolsPhosphoric Monoester HydrolasesPhosphotransferasesBiosensorsFluorescenceLipidsMembraneMicroscopySignalingTransfection

Identifiers

PMID33481232
OpenAlexW3124732683

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.