ArticleArchives of virology2021
Genetic diversity and recombination between turnip yellows virus strains in Australia.
Article in Archives of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
15 citing papers in PubMed, 33 citations in OpenAlex.
- Epidemiological drivers of turnip yellows virus and its vector Myzus persicae in Australian canola (Brassica napus) systems: a 3-year study of commercial crops and noncrop vegetation.Pest management science · 2026Article
- New insights into phylogenetic diversity of maize yellow mosaic virus revealed by viral sequences from Togo.Virus research · 2026Article
- Serological and Molecular Characterization of Prevalent Olive-Associated Viruses in Saudi Arabia.Viruses · 2026Article
- Review
- High-throughput sequencing detected a virus-viroid complex in a single pokeweed plant.Frontiers in plant science · 2024Article
- Turnip yellows virus variants differ in host range, transmissibility, and virulence.Archives of virology · 2023Article
- Evaluation of Resistance of Oilseed Rape Genotypes to Turnip Yellows Virus.Plants (Basel, Switzerland) · 2023Article
- Genetic Diversity Analysis of Brassica Yellows Virus Causing Aberrant Color Symptoms in Oilseed Rape.Plants (Basel, Switzerland) · 2023Article
- Article
- Abundance of Poleroviruses within Tasmanian Pea Crops and Surrounding Weeds, and the Genetic Diversity of TuYV Isolates Found.Viruses · 2022Article
- Genomic Characterisation of an Isolate ofPlants (Basel, Switzerland) · 2022Article
- Symptomless turnip yellows virus infection causes grain yield loss in lentil and field pea: A three-year field study in south-eastern Australia.Frontiers in plant science · 2022Article
- Integrating High throughput Sequencing into Survey Design Reveals Turnip Yellows Virus and Soybean Dwarf Virus in Pea (Viruses · 2021Article
- Virus Diseases of Cereal and Oilseed Crops in Australia: Current Position and Future Challenges.Viruses · 2021Review
- Biology and genetic diversity of phasey bean mild yellows virus, a common virus in legumes in Australia.Archives of virology · 2021Article
Corrections and comments
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Authors and funding
11 authors at 5 institutions in 1 country.
Funding
Abstract
Disease outbreaks caused by turnip yellows virus (TuYV), a member of the genus Polerovirus, family Luteoviridae, regularly occur in canola and pulse crops throughout Australia. To understand the genetic diversity of TuYV for resistance breeding and management, genome sequences of 28 TuYV isolates from different hosts and locations were determined using high-throughput sequencing (HTS). We aimed to identify the parts of the genome that were most variable and clarify the taxonomy of viruses related to TuYV. Poleroviruses contain seven open reading frames (ORFs): ORF 0-2, 3a, and 3-5. Phylogenetic analysis based on the genome sequences, including isolates of TuYV and brassica yellows virus (BrYV) from the GenBank database, showed that most genetic variation among isolates occurred in ORF 5, followed by ORF 0 and ORF 3a. Phylogenetic analysis of ORF 5 revealed three TuYV groups; P5 group 1 and group 3 shared 45-49% amino acid sequence identity, and group 2 is a recombinant between the other two. Phylogenomic analysis of the concatenated ORFs showed that TuYV is paraphyletic with respect to BrYV, and together these taxa form a well-supported monophyletic group. Our results support the hypothesis that TuYV and BrYV belong to the same species and that the phylogenetic topologies of ORF 0, 3a and 5 are incongruent and may not be informative for species demarcation. A number of beet western yellow virus (BWYV)- and TuYV-associated RNAs (aRNA) were also identified by HTS for the first time in Australia.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.