Evidence map›Paper›PMID 33479489›Full record

ArticleThe ISME journal2021

Interspecies metabolite transfer and aggregate formation in a co-culture of Dehalococcoides and Sulfurospirillum dehalogenating tetrachloroethene to ethene.

Stefan Kruse, Dominique Türkowsky, Jan Birkigt, Bruna Matturro, Steffi Franke, Nico Jehmlich, Martin von Bergen, Martin Westermann, Simona Rossetti, Ivonne Nijenhuis and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 53 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Stefan KruseDepartment of Applied and Ecological Microbiology, Institute of Microbiology, Friedrich Schiller University, Jena, Germany.
Dominique TürkowskyDepartment Molecular Systems Biology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.ORCID http://orcid.org/0000-0002-5423-3542
Jan BirkigtDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
Bruna MatturroWater Research Institute, IRSA-CNR, Monterotondo, Rome, Italy.
Steffi FrankeDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
Nico JehmlichDepartment Molecular Systems Biology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.ORCID http://orcid.org/0000-0002-5638-6868
Martin von BergenDepartment Molecular Systems Biology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
Martin WestermannCenter for Electron Microscopy of the University Hospital Jena, Jena, Germany.ORCID http://orcid.org/0000-0002-8311-338X
Simona RossettiWater Research Institute, IRSA-CNR, Monterotondo, Rome, Italy.
Ivonne NijenhuisDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.ORCID http://orcid.org/0000-0001-9737-9501
Lorenz AdrianChair of Geobiotechnology, Technische Universität Berlin, Berlin, Germany.ORCID http://orcid.org/0000-0001-8205-0842
Gabriele DiekertDepartment of Applied and Ecological Microbiology, Institute of Microbiology, Friedrich Schiller University, Jena, Germany.
Tobias GorisDepartment of Applied and Ecological Microbiology, Institute of Microbiology, Friedrich Schiller University, Jena, Germany. tobias.goris@uni-jena.de.ORCID http://orcid.org/0000-0002-9977-5994
Helmholtz Centre for Environmental Research · DESchiller International University · FRWater Research Institute · ITJena University Hospital · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial communities involving dehalogenating bacteria assist in bioremediation of areas contaminated with halocarbons. To understand molecular interactions between dehalogenating bacteria, we co-cultured Sulfurospirillum multivorans, dechlorinating tetrachloroethene (PCE) to cis-1,2-dichloroethene (cDCE), and Dehalococcoides mccartyi strains BTF08 or 195, dehalogenating PCE to ethene. The co-cultures were cultivated with lactate as electron donor. In co-cultures, the bacterial cells formed aggregates and D. mccartyi established an unusual, barrel-like morphology. An extracellular matrix surrounding bacterial cells in the aggregates enhanced cell-to-cell contact. PCE was dehalogenated to ethene at least three times faster in the co-culture. The dehalogenation was carried out via PceA of S. multivorans, and PteA (a recently described PCE dehalogenase) and VcrA of D. mccartyi BTF08, as supported by protein abundance. The co-culture was not dependent on exogenous hydrogen and acetate, suggesting a syntrophic relationship in which the obligate hydrogen consumer D. mccartyi consumes hydrogen and acetate produced by S. multivorans. The cobamide cofactor of the reductive dehalogenase-mandatory for D. mccartyi-was also produced by S. multivorans. D. mccartyi strain 195 dechlorinated cDCE in the presence of norpseudo-B

Indexed as

ChloroflexiTetrachloroethyleneBiodegradation, EnvironmentalCampylobacteraceaeCoculture TechniquesDehalococcoidesEthylenesethyleneEthylenesTetrachloroethylene

Identifiers

PMID33479489
PMCPMC8163811
OpenAlexW3125000311

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.