Evidence map›Paper›PMID 33479307›Full record

ArticleScientific reports2021

Evaluation and comparison of recombinase polymerase amplification coupled with lateral-flow bioassay for Escherichia coli O157:H7 detection using diifeerent genes.

Alka Rani, Vivek B Ravindran, Aravind Surapaneni, Esmaeil Shahsavari, Nagalakshmi Haleyur, Nitin Mantri, Andrew S Ball

Open access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Recent Advancements in Technologies to Detect EnterohaemorrhagicJournal of microbiology and biotechnology · 2023
    Review
  6. Article
  7. Review
  8. Point-of-Care Lateral Flow Detection of ViableFoods (Basel, Switzerland) · 2022
    Article
  9. Review
  10. Review
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Alka RaniSchool of Science, RMIT University, Bundoora West, VIC, 3083, Australia. alka.rani@rmit.edu.au.
Vivek B RavindranSchool of Science, RMIT University, Bundoora West, VIC, 3083, Australia.
Aravind SurapaneniSouth East Water, Frankston, VIC, Australia.
Esmaeil ShahsavariSchool of Science, RMIT University, Bundoora West, VIC, 3083, Australia.
Nagalakshmi HaleyurSchool of Science, RMIT University, Bundoora West, VIC, 3083, Australia.
Nitin MantriThe Pangenomics Group, School of Science, RMIT University, Melbourne, VIC, 3083, Australia.
Andrew S BallSchool of Science, RMIT University, Bundoora West, VIC, 3083, Australia.
RMIT University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shiga toxin-producing Escherichia coli serotype O157:H7 is a food and waterborne zoonotic pathogen causing gastroenteritis in humans. Rapid and simple detection in water and food is imperative to control its spread. However, traditional microbial detection approaches are time-consuming, expensive and complex to operate at the point-of-care without professional training. We present a rapid, simple, sensitive, specific and portable method for detection of E. coli O157:H7 in drinking water, apple juice and milk. We evaluated the effect of gene selection in detecting E. coli O157:H7 using recombinase polymerase amplification coupled with a lateral flow assay using rfbE, fliC and stx gene targets. As low as 100 ag and 1 fg DNA, 4-5 CFU/mL and 10

Indexed as

AnimalsBiological AssayCarbohydrate EpimerasesDNA, BacterialDrinking WaterEscherichia coli O157Escherichia coli ProteinsFlagellinFood MicrobiologyFruit and Vegetable JuicesHumansMilkPolymerase Chain ReactionRecombinasesReproducibility of ResultsShiga ToxinCarbohydrate EpimerasesDNA, BacterialDrinking WaterEscherichia coli ProteinsFlagellinFliC protein, E coliperosamine synthetaseRecombinasesShiga ToxinTransaminases

Identifiers

PMID33479307
PMCPMC7820579
OpenAlexW3124693747

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.