Evidence map›Paper›PMID 33479117›Full record

ArticleRNA (New York, N.Y.)2021

Dynamic association of human Ebp1 with the ribosome.

Varun Bhaskar, Jessica Desogus, Alexandra Graff-Meyer, Andreas D Schenk, Simone Cavadini, Jeffrey A Chao

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. eLife · 2026
    Article
  2. Article
  3. Article
  4. ITAFProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Specialized Ribosomes in Health and Disease.International journal of molecular sciences · 2023
    Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Varun Bhaskar *Friedrich Miescher Institute for Biomedical Research, CH-4058 Basel, Switzerland.
Jessica Desogus *Friedrich Miescher Institute for Biomedical Research, CH-4058 Basel, Switzerland.
Alexandra Graff-MeyerFriedrich Miescher Institute for Biomedical Research, CH-4058 Basel, Switzerland.
Andreas D SchenkFriedrich Miescher Institute for Biomedical Research, CH-4058 Basel, Switzerland.ORCID 0000-0001-9214-2505
Simone CavadiniFriedrich Miescher Institute for Biomedical Research, CH-4058 Basel, Switzerland.
Jeffrey A ChaoFriedrich Miescher Institute for Biomedical Research, CH-4058 Basel, Switzerland.ORCID 0000-0002-5895-9156
Friedrich Miescher Institute · CHUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribosomes are the macromolecular machines at the heart of protein synthesis; however, their function can be modulated by a variety of additional protein factors that directly interact with them. Here, we report the cryo-EM structure of human Ebp1 (p48 isoform) bound to the human 80S ribosome at 3.3 Å resolution. Ebp1 binds in the vicinity of the peptide exit tunnel on the 80S ribosome, and this binding is enhanced upon puromycin-mediated translational inhibition. The association of Ebp1 with the 80S ribosome centers around its interaction with ribosomal proteins eL19 and uL23 and the 28S rRNA. Further analysis of the Ebp1-ribosome complex suggests that Ebp1 can rotate around its insert domain, which may enable it to assume a wide range of conformations while maintaining its interaction with the ribosome. Structurally, Ebp1 shares homology with the methionine aminopeptidase 2 family of enzymes; therefore, this inherent flexibility may also be conserved.

Indexed as

Protein BiosynthesisAdaptor Proteins, Signal TransducingBinding SitesCryoelectron MicroscopyHumansModels, MolecularProtein BindingProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandProtein Interaction Domains and MotifsProtein Synthesis InhibitorsPuromycinRibosomal ProteinsRibosomesRNA-Binding ProteinsRNA, RibosomalAdaptor Proteins, Signal TransducingPA2G4 protein, humanProtein Synthesis InhibitorsPuromycinRibosomal ProteinsRNA-Binding ProteinsRNA, RibosomalEbp1ribosomesingle-particle cryo-EM

Identifiers

PMID33479117
PMCPMC7962488
OpenAlexW3124252477

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.