Evidence map›Paper›PMID 33476933›Full record

ArticleEuropean journal of medicinal chemistry2021

A covalent p97/VCP ATPase inhibitor can overcome resistance to CB-5083 and NMS-873 in colorectal cancer cells.

Gang Zhang, Shan Li, Feng Wang, Amanda C Jones, Alexander F G Goldberg, Benjamin Lin, Scott Virgil, Brian M Stoltz, Raymond J Deshaies, Tsui-Fen Chou

Open access · greenAbstract read
In one paragraph

Article in European journal of medicinal chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. A genome-scale drug discovery pipeline uncovers therapeutic targets and a unique p97 allosteric binding site inProceedings of the National Academy of Sciences of the United States of America · 2025
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  3. Review
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  11. Review
  12. Article
  13. The p97 Inhibitor UPCDC-30245 Blocks Endo-Lysosomal Degradation.Pharmaceuticals (Basel, Switzerland) · 2022
    Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Gang ZhangDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States.
Shan LiDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States.
Feng WangDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States.
Amanda C JonesDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, 91125, United States.
Alexander F G GoldbergDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, 91125, United States.
Benjamin LinDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, 91125, United States.
Scott VirgilDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, 91125, United States.
Brian M StoltzDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, 91125, United States. Electronic address: stoltz@caltech.edu.
Raymond J DeshaiesDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States; Howard Hughes Medical Institute, Chevy Chase, MD, 20815, United States. Electronic address: rdii2003@gmail.com.
Tsui-Fen ChouDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States; Proteome Exploration Laboratory, Beckman Institute, California Institute of Technology, Pasadena, CA, 91125, United States. Electronic address: tfchou@caltech.edu.
California Institute of Technology · US

Funding

The Synthesis of Bioactive Polycyclic Natural ProductsR01GM080269 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STOLTZ, BRIAN M · 2007 to 2022
$5.0M
The Synthesis of Bioactive Natural Products as a Driving Force for Discovery in Organic ChemistryR35GM145239 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI BRIAN M STOLTZ · 2022 to 2026
$3.1M
Dysregulation of p97/VCP disease mutants in IBM and FTLD-UR01NS102279 · NINDS · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI CHOU, TSUI-FEN · 2018 to 2022
$2.8M
Using HTS to Identify Inhibitors of R155H-p97/VCP Mutant to treat IBMPFD/ALSR01NS100815 · NINDS · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI CHOU, TSUI-FEN · 2017 to 2019
$1.0M
Synthesis of Amaryllidaceae Alkaloids via Palladium CatalysisF32GM082000 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI JONES, AMANDA CATHERINE · 2007 to 2009
$142k
NIGMS NIH HHS F32 GM082000NIGMS NIH HHS R01 GM080269NIGMS NIH HHS R35 GM145239NINDS NIH HHS R01 NS100815NINDS NIH HHS R01 NS102279
6 · The paper itself

Abstract

Small-molecule inhibitors of p97 are useful tools to study p97 function. Human p97 is an important AAA ATPase due to its diverse cellular functions and implication in mediating the turnover of proteins involved in tumorigenesis and virus infections. Multiple p97 inhibitors identified from previous high-throughput screening studies are thiol-reactive compounds targeting Cys522 in the D2 ATP-binding domain. Thus, these findings suggest a potential strategy to develop covalent p97 inhibitors. We first used purified p97 to assay several known covalent kinase inhibitors to determine if they can inhibit ATPase activity. We evaluated their selectivity using our dual reporter cells that can distinguish p97 dependent and independent degradation. We selected a β-nitrostyrene scaffold to further study the structure-activity relationship. In addition, we used p97 structures to design and synthesize analogues of pyrazolo[3,4-d]pyrimidine (PP). We incorporated electrophiles into a PP-like compound 17 (4-amino-1-tert-butyl-3-phenyl pyrazolo[3,4-d]pyrimidine) to generate eight compounds. A selective compound 18 (N-(1-(tert-butyl)-3-phenyl-1H-pyrazolo[3,4-d]pyrimidin-4-yl)acrylamide, PPA) exhibited excellent selectivity in an in vitro ATPase activity assay: IC

Indexed as

Adenosine TriphosphatasesAntineoplastic AgentsCell Line, TumorCell ProliferationColorectal NeoplasmsDose-Response Relationship, DrugDrug Resistance, NeoplasmDrug Screening Assays, AntitumorEnzyme InhibitorsHumansModels, MolecularMolecular StructureNuclear ProteinsStructure-Activity RelationshipAdenosine TriphosphatasesAntineoplastic AgentsEnzyme InhibitorsNuclear Proteinsp97 ATPaseAnti-proliferative activityATPase activityCovalent inhibitorDockingOrganic synthesisP97Proteomics

Identifiers

PMID33476933
PMCPMC7954469
OpenAlexW3120441629

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.