Evidence map›Paper›PMID 33476646›Full record

ArticleThe Journal of biological chemistry

Structural basis of trehalose recognition by the mycobacterial LpqY-SugABC transporter.

Christopher M Furze, Ignacio Delso, Enriqueta Casal, Collette S Guy, Chloe Seddon, Chelsea M Brown, Hadyn L Parker, Anjana Radhakrishnan, Raul Pacheco-Gomez, Phillip J Stansfeld and 3 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
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  6. Biochemical and phenotypic characterisation of theCell surface (Amsterdam, Netherlands) · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Christopher M FurzeSchool of Life Sciences, University of Warwick, Coventry, UK.
Ignacio DelsoInstituto de Síntesis Química y Catálisis Homogénea (ISQCH), Universidad de Zaragoza, CSIC, Zaragoza, Spain; School of Pharmacy, University of East Anglia, Norwich, Norfolk, UK.
Enriqueta CasalSchool of Pharmacy, University of East Anglia, Norwich, Norfolk, UK.
Collette S GuySchool of Life Sciences, University of Warwick, Coventry, UK.
Chloe SeddonSchool of Life Sciences, University of Warwick, Coventry, UK.
Chelsea M BrownSchool of Life Sciences, University of Warwick, Coventry, UK.
Hadyn L ParkerSchool of Life Sciences, University of Warwick, Coventry, UK.
Anjana RadhakrishnanSchool of Life Sciences, University of Warwick, Coventry, UK.
Raul Pacheco-GomezMalvern Panalytical Ltd, Malvern, UK.
Phillip J StansfeldSchool of Life Sciences, University of Warwick, Coventry, UK; Department of Chemistry, University of Warwick, Coventry, UK.
Jesus AnguloSchool of Pharmacy, University of East Anglia, Norwich, Norfolk, UK; Departamento de Química Orgánica, Universidad de Sevilla, Sevilla, Spain; Instituto de Investigaciones Químicas (CSIC-US), Sevilla, Spain.
Alexander D CameronSchool of Life Sciences, University of Warwick, Coventry, UK.
Elizabeth FullamSchool of Life Sciences, University of Warwick, Coventry, UK. Electronic address: e.fullam@warwick.ac.uk.
University of Warwick · GBUniversity of East Anglia · GBMalvern Community Hospital · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

The Mycobacterium tuberculosis (Mtb) LpqY-SugABC ATP-binding cassette transporter is a recycling system that imports trehalose released during remodeling of the Mtb cell-envelope. As this process is essential for the virulence of the Mtb pathogen, it may represent an important target for tuberculosis drug and diagnostic development, but the transporter specificity and molecular determinants of substrate recognition are unknown. To address this, we have determined the structural and biochemical basis of how mycobacteria transport trehalose using a combination of crystallography, saturation transfer difference NMR, molecular dynamics, site-directed mutagenesis, biochemical/biophysical assays, and the synthesis of trehalose analogs. This analysis pinpoints key residues of the LpqY substrate binding lipoprotein that dictate substrate-specific recognition and has revealed which disaccharide modifications are tolerated. These findings provide critical insights into how the essential Mtb LpqY-SugABC transporter reuses trehalose and modified analogs and specifies a framework that can be exploited for the design of new antitubercular agents and/or diagnostic tools.

Indexed as

Amino Acid SubstitutionATP-Binding Cassette TransportersBacterial ProteinsBinding SitesBiological TransportCell WallCloning, MolecularCrystallography, X-RayEscherichia coliGene ExpressionGenetic VectorsLigandsMolecular Dynamics SimulationMutationMycobacterium tuberculosisProtein BindingATP-Binding Cassette TransportersBacterial ProteinsLigandsRecombinant ProteinsTrehaloseABC transportercarbohydrateLpqY-SugABC transporterMycobacterium tuberculosisstructural biologystructure-functiontrehalose

Identifiers

PMID33476646
PMCPMC7949145
OpenAlexW3125240774

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.