Evidence map›Paper›PMID 33475698›Full record

ArticleJournal of experimental botany2021

A genome-wide association study reveals cytokinin as a major component in the root defense responses against Ralstonia solanacearum.

Alejandro Alonso-Díaz, Santosh B Satbhai, Roger de Pedro-Jové, Hannah M Berry, Christian Göschl, Cristiana T Argueso, Ondrej Novak, Wolfgang Busch, Marc Valls, Núria S Coll

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Beyond Resistance Genes: Silencing Susceptibility.International journal of molecular sciences · 2026
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  8. Key mechanisms of plant-Frontiers in microbiology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Alejandro Alonso-DíazCentre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Barcelona, Spain.
Santosh B SatbhaiGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Dr Bohr-Gasse 3, Vienna 1030, Austria.
Roger de Pedro-JovéCentre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Barcelona, Spain.
Hannah M BerryDepartment of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO 80523, USA.
Christian GöschlGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Dr Bohr-Gasse 3, Vienna 1030, Austria.
Cristiana T ArguesoDepartment of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO 80523, USA.
Ondrej NovakLaboratory of Growth Regulators, Olomouc, The Czech Republic.
Wolfgang BuschGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Dr Bohr-Gasse 3, Vienna 1030, Austria.
Marc VallsCentre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Barcelona, Spain.
Núria S CollCentre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Barcelona, Spain.
Center for Research in Agricultural Genomics · ESColorado State University · USSalk Institute for Biological Studies · USGregor Mendel Institute of Molecular Plant Biology · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial wilt caused by the soil-borne pathogen Ralstonia solancearum is economically devastating, with no effective methods to fight the disease. This pathogen invades plants through their roots and colonizes their xylem, clogging the vasculature and causing rapid wilting. Key to preventing colonization are the early defense responses triggered in the host's root upon infection, which remain mostly unknown. Here, we have taken advantage of a high-throughput in vitro infection system to screen natural variability associated with the root growth inhibition phenotype caused by R. solanacearum in Arabidopsis during the first hours of infection. To analyze the genetic determinants of this trait, we have performed a genome-wide association study, identifying allelic variation at several loci related to cytokinin metabolism, including genes responsible for biosynthesis and degradation of cytokinin. Further, our data clearly demonstrate that cytokinin signaling is induced early during the infection process and cytokinin contributes to immunity against R. solanacearum. This study highlights a new role for cytokinin in root immunity, paving the way for future research that will help in understanding the mechanisms underpinning root defenses.

Indexed as

ArabidopsisRalstonia solanacearumCytokininsGenome-Wide Association StudyPlant DiseasesCytokininsBacterial wiltcytokinindefenseGWAShormonesimmune systemRalstonia solanacearumrootsalicylic acid

Identifiers

PMID33475698
PMCPMC8006551
OpenAlexW3123984708

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.