Evidence map›Paper›PMID 33475341›Full record

ArticleBioconjugate chemistry2021

Chemo-Mechanical Modulation of Cell Motions Using DNA Nanosprings.

Deepak Karna, Morgan Stilgenbauer, Sagun Jonchhe, Kazuya Ankai, Ibuki Kawamata, Yunxi Cui, Yao-Rong Zheng, Yuki Suzuki, Hanbin Mao

Open access · greenAbstract read
In one paragraph

Article in Bioconjugate chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 34 citations in OpenAlex.

  1. pH-Driven Actuation of Unmodified DNA Origami Rectangles.Angewandte Chemie (International ed. in English) · 2026
    Article
  2. Review
  3. Precise Regulation of Membrane Proteins: From Physical Technology to Biomolecular Strategy.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  4. Review
  5. Design biology and mind-body health.Journal, genetic engineering & biotechnology · 2025
    Review
  6. Review
  7. Wireframe DNA Origami Capable of Vertex-protruding Transformation.Chembiochem : a European journal of chemical biology · 2025
    Article
  8. Article
  9. Molecular Force Sensors for Biological Application.International journal of molecular sciences · 2024
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Recent developments in DNA-based mechanical nanodevices.Chemical communications (Cambridge, England) · 2022
    Review
  15. DNA origami nano-mechanics.Chemical Society reviews · 2021
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Deepak KarnaDepartment of Chemistry & Biochemistry, Kent State University, Kent, Ohio 44242, United States.ORCID 0000-0003-3370-0997
Morgan StilgenbauerDepartment of Chemistry & Biochemistry, Kent State University, Kent, Ohio 44242, United States.
Sagun JonchheDepartment of Chemistry & Biochemistry, Kent State University, Kent, Ohio 44242, United States.ORCID 0000-0003-4361-6641
Kazuya AnkaiFrontier Research Institute for Interdisciplinary Sciences, Tohoku University, 6-3 Aramaki-aza Aoba, Aoba-ku, Sendai, 980-8578, Japan.
Ibuki KawamataDepartment of Robotics, Graduate School of Engineering, Tohoku University, 6-6-01 Aramaki-aza Aoba, Aoba-ku, Sendai, 980-8579, Japan.ORCID 0000-0002-1955-8827
Yunxi CuiDepartment of Chemistry & Biochemistry, Kent State University, Kent, Ohio 44242, United States.ORCID 0000-0002-3830-3336
Yao-Rong ZhengDepartment of Chemistry & Biochemistry, Kent State University, Kent, Ohio 44242, United States.ORCID 0000-0003-4605-1121
Yuki SuzukiFrontier Research Institute for Interdisciplinary Sciences, Tohoku University, 6-3 Aramaki-aza Aoba, Aoba-ku, Sendai, 980-8578, Japan.ORCID 0000-0003-1848-0105
Hanbin MaoDepartment of Chemistry & Biochemistry, Kent State University, Kent, Ohio 44242, United States.ORCID 0000-0002-6720-9429
Kent State University · USTohoku University · JP

Funding

Specific Recognition of G-quadruplexesR01CA236350 · NCI · KENT STATE UNIVERSITY · PI MAO, HANBIN · 2018 to 2022
$1.6M
NCI NIH HHS R01 CA236350
6 · The paper itself

Abstract

Cell motions such as migration and change in cellular morphology are essential activities for multicellular organism in response to environmental stimuli. These activities are a result of coordinated clustering/declustering of integrin molecules at the cell membrane. Here, we prepared DNA origami nanosprings to modulate cell motions by targeting the clustering of integrin molecules. Each nanospring was modified with arginyl-glycyl-aspartic acid (RGD) domains with a spacing such that when the nanospring is coiled, the RGD ligands trigger the clustering of integrin molecules, which changes cell motions. The coiling or uncoiling of the nanospring is controlled, respectively, by the formation or dissolution of an i-motif structure between neighboring piers in the DNA origami nanodevice. At slightly acidic pH (<6.5), the folding of the i-motif leads to the coiling of the nanospring, which inhibits the motion of HeLa cells. At neutrality (pH 7.4), the unfolding of the i-motif allows cells to resume mechanical movement as the nanospring becomes uncoiled. We anticipate that this pH-responsive DNA nanoassembly is valuable to inhibit the migration of metastatic cancer cells in acidic extracellular environment. Such a chemo-mechanical modulation provides a new mechanism for cells to mechanically respond to endogenous chemical cues.

Indexed as

Cell MovementDNAHeLa CellsHumansHydrogen-Ion ConcentrationNanostructuresDNA

Identifiers

PMID33475341
PMCPMC8199798
OpenAlexW3125984114

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.