Evidence map›Paper›PMID 33472826›Full record

ReviewThe Journal of neuroscience : the official journal of the Society for Neuroscience2021

Highlights from the Era of Open Source Web-Based Tools.

Kristin R Anderson, Julie A Harris, Lydia Ng, Pjotr Prins, Sara Memar, Bengt Ljungquist, Daniel Fürth, Robert W Williams, Giorgio A Ascoli, Dani Dumitriu

Abstract readReview
In one paragraph

Review in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Cell morphologies in the nervous system: Glia steal the limelight.The Journal of comparative neurology · 2023
    Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kristin R AndersonDepartments of Pediatrics and Psychiatry, Columbia University, New York, New York 10032.ORCID 0000-0002-1842-0383
Julie A HarrisAllen Institute for Brain Science, Seattle, Washington 98109.ORCID 0000-0003-0820-2021
Lydia NgAllen Institute for Brain Science, Seattle, Washington 98109.ORCID 0000-0002-7499-3514
Pjotr PrinsDepartment of Genetics, Genomics and Informatics, Center for Integrative and Translational Genomics, University of Tennessee Health Science Center, Memphis, Tennessee 38163.ORCID 0000-0002-8021-9162
Sara MemarRobarts Research Institute, BrainsCAN, Schulich School of Medicine & Dentistry, Western University, London, Ontario N6A 3K7, Canada.ORCID 0000-0002-0282-2548
Bengt LjungquistCenter for Neural Informatics, Structures, and Plasticity, Krasnow Institute for Advanced Study; and Department of Bioengineering, Volgenau School of Engineering, George Mason University, Fairfax, Virginia 22030.ORCID 0000-0002-3934-5853
Daniel FürthCold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724.ORCID 0000-0002-6017-3419
Robert W WilliamsDepartment of Genetics, Genomics and Informatics, Center for Integrative and Translational Genomics, University of Tennessee Health Science Center, Memphis, Tennessee 38163.ORCID 0000-0001-8924-4447
Giorgio A AscoliCenter for Neural Informatics, Structures, and Plasticity, Krasnow Institute for Advanced Study; and Department of Bioengineering, Volgenau School of Engineering, George Mason University, Fairfax, Virginia 22030.ORCID 0000-0002-0964-676X
Dani DumitriuDepartments of Pediatrics and Psychiatry, Columbia University, New York, New York 10032 dani.dumitriu@columbia.edu.ORCID 0000-0002-7873-5192

Funding

Anatomical characterization of neuronal cell types of the mouse brainU01MH114829 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ASCOLI, GIORGIO A, DONG, HONG-WEI · 2017 to 2021
$13.9M
Generation and Description of Neuronal Morphology and ConnectivityR01NS039600 · NINDS · GEORGE MASON UNIVERSITY · PI ASCOLI, GIORGIO A · 1999 to 2024
$6.9M
Translational Neuroscience Training Grant.T32MH015174 · NIMH · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI DENNY, CHRISTINE ANN · 1985 to 2020
$4.0M
TIM Project NIDA P30 CenterP30DA044223 · NIDA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI SABA, LAURA MAREN · 2017 to 2021
$3.9M
Cytoskeletal mechanisms of dendrite arbor shape developmentR01NS086082 · NINDS · GEORGIA STATE UNIVERSITY · PI ASCOLI, GIORGIO A, COX, DANIEL N · 2013 to 2023
$3.1M
Multiscale connectomic principles of resilience and susceptibility in mouseR01MH111918 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DUMITRIU, DANI · 2017 to 2021
$1.8M
NICHD NIH HHS L40 HD103204NIDA NIH HHS P30 DA044223NIMH NIH HHS L40 MH114384NIMH NIH HHS R01 MH111918NIMH NIH HHS T32 MH015174NIMH NIH HHS U01 MH114829NINDS NIH HHS R01 NS039600NINDS NIH HHS R01 NS086082
6 · The paper itself

Abstract

High digital connectivity and a focus on reproducibility are contributing to an open science revolution in neuroscience. Repositories and platforms have emerged across the whole spectrum of subdisciplines, paving the way for a paradigm shift in the way we share, analyze, and reuse vast amounts of data collected across many laboratories. Here, we describe how open access web-based tools are changing the landscape and culture of neuroscience, highlighting six free resources that span subdisciplines from behavior to whole-brain mapping, circuits, neurons, and gene variants.

Indexed as

Access to InformationAnimalsBrainDatasets as TopicGene Regulatory NetworksHumansInternetNerve NetNeuronsneuroscienceonline repositoriesopen accessopen scienceopen sourceweb-based tools

Identifiers

PMID33472826
PMCPMC7880282

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.