Evidence map›Paper›PMID 33469951›Full record

ArticleThe EMBO journal2021

The C-degron pathway eliminates mislocalized proteins and products of deubiquitinating enzymes.

Chi-Wei Yeh, Wei-Chieh Huang, Pang-Hung Hsu, Kun-Hai Yeh, Li-Chin Wang, Paul Wei-Che Hsu, Hsiu-Chuan Lin, Yi-Ning Chen, Shu-Chuan Chen, Chen-Hsiang Yeang and 1 more

Abstract read
In one paragraph

Article in The EMBO journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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  10. The herpesvirus UL49.5 protein hijacks a cellular C-degron pathway to drive TAP transporter degradation.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Chi-Wei YehInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Wei-Chieh HuangInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Pang-Hung HsuDepartment of Life Science, Institute of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan.ORCID 0000-0001-6873-6434
Kun-Hai YehInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Li-Chin WangInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Paul Wei-Che HsuInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Hsiu-Chuan LinInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Yi-Ning ChenInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Shu-Chuan ChenInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Chen-Hsiang YeangGenome and Systems Biology Degree Program, National Taiwan University and Academia Sinica, Taipei, Taiwan.
Hsueh-Chi S YenInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.ORCID 0000-0003-3511-4414

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein termini are determinants of protein stability. Proteins bearing degradation signals, or degrons, at their amino- or carboxyl-termini are eliminated by the N- or C-degron pathways, respectively. We aimed to elucidate the function of C-degron pathways and to unveil how normal proteomes are exempt from C-degron pathway-mediated destruction. Our data reveal that C-degron pathways remove mislocalized cellular proteins and cleavage products of deubiquitinating enzymes. Furthermore, the C-degron and N-degron pathways cooperate in protein removal. Proteome analysis revealed a shortfall in normal proteins targeted by C-degron pathways, but not of defective proteins, suggesting proteolysis-based immunity as a constraint for protein evolution/selection. Our work highlights the importance of protein termini for protein quality surveillance, and the relationship between the functional proteome and protein degradation pathways.

Indexed as

ProteolysisUbiquitinationAmino Acid MotifsCell Line, TumorHEK293 CellsHumansProtein TransportProteomeReceptors, CytokineCRLF2 protein, humanProteomeReceptors, CytokineC-degron pathwayCRL2 ubiquitin ligaseN-degron pathwayprotein spatial quality controlprotein termini

Identifiers

PMID33469951
PMCPMC8013793

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.