Evidence map›Paper›PMID 33469465›Full record

ArticleFrontiers in genetics2020

Single-Cell RNA Sequencing of Tocilizumab-Treated Peripheral Blood Mononuclear Cells as an

Arya Zarinsefat, George Hartoularos, Dmitry Rychkov, Priyanka Rashmi, Sindhu Chandran, Flavio Vincenti, Chun J Yee, Minnie M Sarwal

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Arya ZarinsefatDepartment of Surgery, University of California, San Francisco, San Francisco, CA, United States.
George HartoularosDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, United States.
Dmitry RychkovDepartment of Surgery, University of California, San Francisco, San Francisco, CA, United States.
Priyanka RashmiDepartment of Surgery, University of California, San Francisco, San Francisco, CA, United States.
Sindhu ChandranDepartment of Medicine, University of California, San Francisco, San Francisco, CA, United States.
Flavio VincentiDepartment of Surgery, University of California, San Francisco, San Francisco, CA, United States.
Chun J YeeDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, United States.
Minnie M SarwalDepartment of Surgery, University of California, San Francisco, San Francisco, CA, United States.
University of California, San Francisco · US

Funding

Novel Therapies to Modulate the Inflammatory Alloresponse in Renal GraftsU01AI113362 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI VINCENTI, FLAVIO · 2014 to 2023
$15.2M
Project 3: Mapping the Evolution of Chronic Transplant Injury in the Context of CMV InfectionU19AI128913 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HOFFMANN, ALEXANDER · 2017 to 2021
$11.2M
Filling a Void of Research (FAVOR) Training for Transplant SurgeonsT32AI125222 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PETER G STOCK, Minnie M Sarwal · 2016 to 2026
$3.4M
The KIDCOV Study: Assessment of Kidney Injury and Associated Risk Factors for SARS-CoV-2R01DK109720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI REISER, JOCHEN, SARWAL, MINNIE M · 2017 to 2021
$3.2M
Medical Research Council MR/L023784/1NIAID NIH HHS T32 AI125222NIAID NIH HHS U01 AI113362NIAID NIH HHS U19 AI128913NIDDK NIH HHS R01 DK109720
6 · The paper itself

Abstract

COVID-19 has posed a significant threat to global health. Early data has revealed that IL-6, a key regulatory cytokine, plays an important role in the cytokine storm of COVID-19. Multiple trials are therefore looking at the effects of Tocilizumab, an IL-6 receptor antibody that inhibits IL-6 activity, on treatment of COVID-19, with promising findings. As part of a clinical trial looking at the effects of Tocilizumab treatment on kidney transplant recipients with subclinical rejection, we performed single-cell RNA sequencing of comparing stimulated PBMCs before and after Tocilizumab treatment. We leveraged this data to create an

Indexed as

bioinformatics and computational biologyCOVID-19kidney transplantationsingle cell RNA seqtocilizumab (IL-6 inhibitor)transcriptomics

Identifiers

PMID33469465
PMCPMC7813999
OpenAlexW3120547942

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.