Evidence map›Paper›PMID 33468689›Full record

ArticlemBio2021

At Least Seven Distinct Rotavirus Genotype Constellations in Bats with Evidence of Reassortment and Zoonotic Transmissions.

Ceren Simsek, Victor Max Corman, Hermann Ulrich Everling, Alexander N Lukashev, Andrea Rasche, Gael Darren Maganga, Tabea Binger, Daan Jansen, Leen Beller, Ward Deboutte and 14 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 2 pooled it
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 2 syntheses or guidelines pooled it, 53 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 10 institutions in 8 countries.

Ceren Simsek *KU Leuven-University of Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Leuven, Belgium.ORCID 0000-0002-3516-5791
Victor Max Corman *Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humbolt-Universität zu Berlin and Berlin Institute of Health, Institute of Virology, Berlin, Germany.ORCID 0000-0002-3605-0136
Hermann Ulrich Everling *Institute of Virology, University of Bonn Medical Centre, Bonn, Germany.
Alexander N LukashevSechenov University, Moscow, Russia.
Andrea RascheCharité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humbolt-Universität zu Berlin and Berlin Institute of Health, Institute of Virology, Berlin, Germany.
Gael Darren MagangaCentre International de Recherches Médicales de Franceville, Franceville, Gabon.
Tabea BingerKumasi Centre for Collaborative Research in Tropical Medicine (KCCR), Kumasi, Ghana.
Daan JansenKU Leuven-University of Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Leuven, Belgium.ORCID 0000-0003-4612-6891
Leen BellerKU Leuven-University of Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Leuven, Belgium.
Ward DeboutteKU Leuven-University of Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Leuven, Belgium.
Florian Gloza-RauschNoctalis, Centre for Bat Protection and Information, Bad Segeberg, Germany.
Antje Seebens-HoyerNoctalis, Centre for Bat Protection and Information, Bad Segeberg, Germany.
Stoian YordanovForestry Board Directorate of Strandja Natural Park, Malko Tarnovo, Bulgaria.
Augustina SylverkenKumasi Centre for Collaborative Research in Tropical Medicine (KCCR), Kumasi, Ghana.
Samuel OppongKwame Nkrumah University of Science and Technology, Kumasi, Ghana.
Yaw Adu SarkodieKwame Nkrumah University of Science and Technology, Kumasi, Ghana.
Peter ValloInstitute of Vertebrate Biology, Academy of Sciences of the Czech Republic, v.v.i., Brno, Czech Republic.
Eric M LeroyInstitut de Recherche pour le Développement, UMR 224 (MIVEGEC), IRD/CNRS/Montpellier University, Montpellier, France.
Mathieu BourgarelCIRAD, UMR ASTRE, Harare, Zimbabwe.
Kwe Claude YindaKU Leuven-University of Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Leuven, Belgium.ORCID 0000-0002-5195-5478
Marc Van RanstKU Leuven-University of Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Leuven, Belgium.
Christian DrostenCharité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humbolt-Universität zu Berlin and Berlin Institute of Health, Institute of Virology, Berlin, Germany.
Jan Felix DrexlerCharité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humbolt-Universität zu Berlin and Berlin Institute of Health, Institute of Virology, Berlin, Germany Felix.drexler@Charite.de Jelle.matthijnssens@Kuleuven.be.ORCID 0000-0002-3509-0232
Jelle MatthijnssensKU Leuven-University of Leuven, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Leuven, Belgium Felix.drexler@Charite.de Jelle.matthijnssens@Kuleuven.be.ORCID 0000-0003-1188-9733
Rega Institute for Medical Research · BEHumboldt-Universität zu Berlin · DEKwame Nkrumah University of Science and Technology · GHCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRCentre International de Recherches Médicales de Franceville · GACentre National de la Recherche Scientifique · FRCzech Academy of Sciences, Institute of Vertebrate Biology · CZSechenov University · RUUniversity of Bonn · DEUniversity of Forestry · BG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bats host many viruses pathogenic to humans, and increasing evidence suggests that rotavirus A (RVA) also belongs to this list. Rotaviruses cause diarrheal disease in many mammals and birds, and their segmented genomes allow them to reassort and increase their genetic diversity. Eighteen out of 2,142 bat fecal samples (0.8%) collected from Europe, Central America, and Africa were PCR-positive for RVA, and 11 of those were fully characterized using viral metagenomics. Upon contrasting their genomes with publicly available data, at least 7 distinct bat RVA genotype constellations (GCs) were identified, which included evidence of reassortments and 6 novel genotypes. Some of these constellations are spread across the world, whereas others appear to be geographically restricted. Our analyses also suggest that several unusual human and equine RVA strains might be of bat RVA origin, based on their phylogenetic clustering, despite various levels of nucleotide sequence identities between them. Although SA11 is one of the most widely used reference strains for RVA research and forms the backbone of a reverse genetics system, its origin remained enigmatic. Remarkably, the majority of the genotypes of SA11-like strains were shared with Gabonese bat RVAs, suggesting a potential common origin. Overall, our findings suggest an underexplored genetic diversity of RVAs in bats, which is likely only the tip of the iceberg. Increasing contact between humans and bat wildlife will further increase the zoonosis risk, which warrants closer attention to these viruses.

Indexed as

AnimalsChiropteraCOVID-19DiarrheaGenetic VariationGenome, ViralGenotypeHorsesHumansMetagenomicsMiddle East Respiratory Syndrome CoronavirusPhylogenyRotavirusRotavirus InfectionsSARS-CoV-2Zoonosesbat rotavirusrotavirus genetic diversitySA11Viral metagenomicszoonosis

Identifiers

PMID33468689
PMCPMC7845630
OpenAlexW3125412828

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.