Evidence map›Paper›PMID 33468676›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Autoinhibitory elements of the Chd1 remodeler block initiation of twist defects by destabilizing the ATPase motor on the nucleosome.

Ilana M Nodelman, Zhongtian Shen, Robert F Levendosky, Gregory D Bowman

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
  2. Role of CHD chromatin remodelers in heart development.World journal of pediatrics : WJP · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. How does CHD4 slide nucleosomes?Biochemical Society transactions · 2024
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ilana M NodelmanThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.
Zhongtian ShenThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.ORCID https://orcid.org/0000-0002-9619-6233
Robert F LevendoskyThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.ORCID https://orcid.org/0000-0002-5101-0810
Gregory D BowmanThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218 gdbowman@jhu.edu.ORCID https://orcid.org/0000-0001-8025-4315

Funding

CELLULAR AND MOLECULAR BIOLOGYT32GM007231 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VAN DOREN, MARK B · 1985 to 2020
$18.4M
Structural and Functional Characterization of the Chd1 Chromatin RemodelerR01GM084192 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BOWMAN, GREGORY DEAN · 2008 to 2024
$6.3M
Acquisition of GE Typhoon FLA9500 Variable Mode ImagerS10OD021567 · OD · JOHNS HOPKINS UNIVERSITY · PI MCCAFFERY, J. MICHAEL · 2017 to 2017
$147k
NIGMS NIH HHS R01 GM084192NIGMS NIH HHS T32 GM007231NIH HHS S10 OD021567
6 · The paper itself

Abstract

Chromatin remodelers are ATP (adenosine triphosphate)-powered motors that reposition nucleosomes throughout eukaryotic chromosomes. Remodelers possess autoinhibitory elements that control the direction of nucleosome sliding, but underlying mechanisms of inhibition have been unclear. Here, we show that autoinhibitory elements of the yeast Chd1 remodeler block nucleosome sliding by preventing initiation of twist defects. We show that two autoinhibitory elements-the chromodomains and bridge-reinforce each other to block sliding when the DNA-binding domain is not bound to entry-side DNA. Our data support a model where the chromodomains and bridge target nucleotide-free and ADP-bound states of the ATPase motor, favoring a partially disengaged state of the ATPase motor on the nucleosome. By bypassing distortions of nucleosomal DNA prior to ATP binding, we propose that autoinhibitory elements uncouple the ATP binding/hydrolysis cycle from DNA translocation around the histone core.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateChromatin Assembly and DisassemblyChromosomesDNA-Binding ProteinsHistonesHydrolysisNucleosomesProtein BindingProtein DomainsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenosine TriphosphatasesAdenosine TriphosphateCHD1 protein, S cerevisiaeDNA-Binding ProteinsHistonesNucleosomesSaccharomyces cerevisiae Proteinsallosteryasymmetric histone corechromatin remodelingnucleosome slidingSnf2 ATPase

Identifiers

PMID33468676
PMCPMC7848600

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.