Evidence map›Paper›PMID 33468660›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Long-range structural defects by pathogenic mutations in most severe glucose-6-phosphate dehydrogenase deficiency.

Naoki Horikoshi, Sunhee Hwang, Cornelius Gati, Tsutomu Matsui, Carlos Castillo-Orellana, Andrew G Raub, Adriana A Garcia, Fatemeh Jabbarpour, Alexander Batyuk, Joshua Broweleit and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
9.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Structural basis of the allosteric regulation of cyanobacterial glucose-6-phosphate dehydrogenase by the redox sensor OpcA.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Article
  8. Glucose-6-phosphate dehydrogenase and its 3D structures from crystallography and electron cryo-microscopy.Acta crystallographica. Section F, Structural biology communications · 2024
    Review
  9. Article
  10. Adaptable SEC-SAXS data collection for higher quality structure analysis in solution.Protein science : a publication of the Protein Society · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Allosteric role of a structural NADPProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Molecular dynamics of G6PD variants from sub-Saharan Africa.Biochemistry and biophysics reports · 2022
    Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 3 countries.

Naoki HorikoshiLife Science Center for Survival Dynamics, University of Tsukuba, Ibaraki 305-8577, Japan.ORCID https://orcid.org/0000-0003-1842-6934
Sunhee HwangDepartment of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, CA 94305.
Cornelius GatiBiological Sciences Division, SLAC National Accelerator Laboratory, Menlo Park, CA 94025.
Tsutomu MatsuiStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, CA 94025.
Carlos Castillo-OrellanaDepartamento de Físico-Química, Facultad de Ciencias Químicas, Universidad de Concepción, Concepción 94030000, Chile.ORCID https://orcid.org/0000-0003-2703-1678
Andrew G RaubDepartment of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, CA 94305.
Adriana A GarciaDepartment of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, CA 94305.
Fatemeh JabbarpourBiological Sciences Division, SLAC National Accelerator Laboratory, Menlo Park, CA 94025.
Alexander BatyukLinac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, CA 94025.ORCID https://orcid.org/0000-0002-9393-2880
Joshua BroweleitDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305.
Xinyu XiangDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305.ORCID https://orcid.org/0000-0002-8358-2960
Andrew ChiangDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305.ORCID https://orcid.org/0000-0002-0420-3046
Rachel BroweleitDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305.
Esteban Vöhringer-MartinezDepartamento de Físico-Química, Facultad de Ciencias Químicas, Universidad de Concepción, Concepción 94030000, Chile.
Daria Mochly-RosenDepartment of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, CA 94305; mochly@stanford.edu soichi.wakatsuki@stanford.edu.ORCID https://orcid.org/0000-0002-6691-8733
Soichi WakatsukiBiological Sciences Division, SLAC National Accelerator Laboratory, Menlo Park, CA 94025; mochly@stanford.edu soichi.wakatsuki@stanford.edu.ORCID https://orcid.org/0000-0001-5896-7968
Stanford University · USSLAC National Accelerator Laboratory · USUniversity of Concepción · CLUniversity of Tsukuba · JP

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Development of a novel treatment for hyperbilirubinemia-induced kernicterusR01HD084422 · NICHD · STANFORD UNIVERSITY · PI MOCHLY-ROSEN, DARIA, STEVENSON, DAVID K · 2016 to 2020
$1.6M
PILATUS3 X 1M X-ray detectorS10OD021512 · OD · STANFORD UNIVERSITY · PI WEIS, WILLIAM I · 2016 to 2016
$550k
Electron transfer activity of mitoNEET and regulation of energy metabolism in mitochondriaR15GM129564 · NIGMS · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI DING, HUANGEN · 2018 to 2018
$433k
NICHD NIH HHS R01 HD084422NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R15 GM129564NIH HHS S10 OD021512
6 · The paper itself

Abstract

Glucose-6-phosphate dehydrogenase (G6PD) deficiency is the most common blood disorder, presenting multiple symptoms, including hemolytic anemia. It affects 400 million people worldwide, with more than 160 single mutations reported in G6PD. The most severe mutations (about 70) are classified as class I, leading to more than 90% loss of activity of the wild-type G6PD. The crystal structure of G6PD reveals these mutations are located away from the active site, concentrating around the noncatalytic NADP

Indexed as

MutationBinding SitesCloning, MolecularCoenzymesCrystallography, X-RayEscherichia coliGene ExpressionGenetic VectorsGlucosephosphate DehydrogenaseGlucosephosphate Dehydrogenase DeficiencyHumansKineticsLeucineModels, MolecularMolecular Dynamics SimulationNADPCoenzymesGlucosephosphate DehydrogenaseLeucineNADPProlineRecombinant ProteinsenzymopathyG6PD deficiencyhemolytic anemiaNADP+structural defects

Identifiers

PMID33468660
PMCPMC7848525
OpenAlexW3122982387

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.