Evidence map›Paper›PMID 33468127›Full record

ArticleMicrobial cell factories2021

Metabolic engineering of Rhodococcus jostii RHA1 for production of pyridine-dicarboxylic acids from lignin.

Edward M Spence, Leonides Calvo-Bado, Paul Mines, Timothy D H Bugg

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. From Biocontrol to Synthesis: Innovative Progress ofInternational journal of molecular sciences · 2025
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Metabolic engineering ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Review
  13. Article
  14. Article
  15. The chemical logic of enzymatic lignin degradation.Chemical communications (Cambridge, England) · 2024
    Review
  16. Bacterial transformation of lignin: key enzymes and high-value products.Biotechnology for biofuels and bioproducts · 2024
    Review
  17. Article
  18. Article
  19. Engineering ofHeliyon · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Edward M SpenceDepartment of Chemistry, University of Warwick, Coventry, CV4 7AL, UK.
Leonides Calvo-BadoDepartment of Chemistry, University of Warwick, Coventry, CV4 7AL, UK.
Paul MinesBiome Bioplastics Ltd, North Road, Marchwood, Southampton, SO40 4BL, UK.
Timothy D H BuggDepartment of Chemistry, University of Warwick, Coventry, CV4 7AL, UK. T.D.Bugg@warwick.ac.uk.ORCID http://orcid.org/0000-0003-3964-4498
University of Warwick · GB

Funding

Biotechnology and Biological Sciences Research Council BB/T010622/1Engineering and Physical Sciences Research Council TS/M008282/1
6 · The paper itself

Abstract

Genetic modification of Rhodococcus jostii RHA1 was carried out in order to optimise the production of pyridine-2,4-dicarboxylic acid and pyridine-2,5-dicarboxylic acid bioproducts from lignin or lignocellulose breakdown, via insertion of either the Sphingobium SYK-6 ligAB genes or Paenibacillus praA gene respectively. Insertion of inducible plasmid pTipQC2 expression vector containing either ligAB or praA genes into a ΔpcaHG R. jostii RHA1 gene deletion strain gave 2-threefold higher titres of PDCA production from lignocellulose (200-287 mg/L), compared to plasmid expression in wild-type R. jostii RHA1. The ligAB genes were inserted in place of the chromosomal pcaHG genes encoding protocatechuate 3,4-dioxygenase, under the control of inducible P

Indexed as

Bacterial ProteinsCarbonDicarboxylic AcidsGene DeletionGene Expression Regulation, BacterialLigninMetabolic EngineeringMetabolic Networks and PathwaysMultigene FamilyPromoter Regions, GeneticProtocatechuate-3,4-DioxygenasePyridinesRhodococcusBacterial ProteinsCarbonDicarboxylic AcidsLigninlignocelluloseProtocatechuate-3,4-DioxygenasePyridinesGene promoterLignin degradationMetabolic engineeringPyridine dicarboxylic acidRhodococcus jostii RHA1

Identifiers

PMID33468127
PMCPMC7814577
OpenAlexW3121136199

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.