Evidence map›Paper›PMID 33467501›Full record

ArticleJournal of clinical medicine2021

Self-Collection of Saliva Specimens as a Suitable Alternative to Nasopharyngeal Swabs for the Diagnosis of SARS-CoV-2 by RT-qPCR.

Camino Trobajo-Sanmartín, Marta Adelantado, Ana Navascués, María J Guembe, Isabel Rodrigo-Rincón, Jesús Castilla, Carmen Ezpeleta

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 3 pooled it
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 3 syntheses or guidelines pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Review
  6. Article
  7. [Main changes in the «COVID-19 in paediatrics» clinical practice guideline].Anales de pediatria (Barcelona, Spain : 2003) · 2022
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Mouth Washing Impaired SARS-CoV-2 Detection in Saliva.Diagnostics (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Camino Trobajo-SanmartínDepartment of Clinical Microbiology, Complejo Hospitalario de Navarra, 31008 Pamplona, Spain.ORCID 0000-0001-5105-252X
Marta AdelantadoDepartment of Clinical Microbiology, Complejo Hospitalario de Navarra, 31008 Pamplona, Spain.
Ana NavascuésDepartment of Clinical Microbiology, Complejo Hospitalario de Navarra, 31008 Pamplona, Spain.
María J GuembeServicio de Apoyo a la Gestión Clínica y Continuidad Asistencial, Complejo Hospitalario de Navarra, 31008 Pamplona, Spain.
Isabel Rodrigo-RincónInstituto de Investigación Sanitaria de Navarra (IdiSNA), 31008 Pamplona, Spain.ORCID 0000-0002-5842-7037
Jesús CastillaInstituto de Investigación Sanitaria de Navarra (IdiSNA), 31008 Pamplona, Spain.ORCID 0000-0002-6396-7265
Carmen EzpeletaDepartment of Clinical Microbiology, Complejo Hospitalario de Navarra, 31008 Pamplona, Spain.
Complejo Hospitalario de Navarra · ESInstituto de Salud Pública de Navarra · ES

Funding

European Regional Development Fund INT19/00028Horizon 2020 I-MOVE-COVID-19, grant agreement No 101003673Instituto de Salud Carlos III COV20/00542
6 · The paper itself

Abstract

A nasopharyngeal swab is a sample used for the diagnosis of SARS-CoV-2 infection. Saliva is a sample easier to obtain and the risk of contagion for the professional is lower. This study aimed to evaluate the utility of saliva for the diagnosis of SARS-CoV-2 infection. This prospective study involved 674 patients with suspected SARS-CoV-2 infection. Paired nasopharyngeal and saliva samples were processed by RT-qPCR. Sensitivity, specificity, and kappa coefficient were used to evaluate the results from both samples. We considered the influence of age, symptoms, chronic conditions, and sample processing with lysis buffer. Of the 674 patients, 636 (94.4%) had valid results from both samples. The virus detection in saliva compared to a nasopharyngeal sample (gold standard) was 51.9% (95% CI: 46.3%-57.4%) and increased to 91.6% (95% CI: 86.7%-96.5%) when the cycle threshold (Ct) was ≤ 30. The specificity of the saliva sample was 99.1% (95% CI: 97.0%-99.8%). The concordance between samples was 75% (κ = 0.50; 95% CI: 0.45-0.56). The Ct values were significantly higher in saliva. In conclusion, saliva sample utility is limited for clinical diagnosis, but could be a useful alternative for the detection of SARS-CoV-2 in massive screening studies, when the availability of trained professionals for sampling or personal protection equipment is limited.

Indexed as

COVID-19nasopharyngealRT-qPCRsalivaSARS-CoV-2

Identifiers

PMID33467501
PMCPMC7830328
OpenAlexW3120611829

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.