Evidence map›Paper›PMID 33466932›Full record

ArticleVaccines2021

Linear B-Cell Epitopes in Human Norovirus GII.4 Capsid Protein Elicit Blockade Antibodies.

Hassan Moeini, Suliman Qadir Afridi, Sainitin Donakonda, Percy A Knolle, Ulrike Protzer, Dieter Hoffmann

Abstract read
In one paragraph

Article in Vaccines, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Identification of Immunogenic Linear B-Cell Epitopes inPathogens (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hassan MoeiniInstitute of Virology, School of Medicine, Technical University of Munich, 81675 Munich, Germany.
Suliman Qadir AfridiInstitute of Virology, School of Medicine, Technical University of Munich, 81675 Munich, Germany.
Sainitin DonakondaInstitute of Molecular Immunology, School of Medicine, Technical University of Munich, 81675 Munich, Germany.ORCID 0000-0003-3216-8759
Percy A KnolleInstitute of Molecular Immunology, School of Medicine, Technical University of Munich, 81675 Munich, Germany.
Ulrike ProtzerInstitute of Virology, School of Medicine, Technical University of Munich, 81675 Munich, Germany.ORCID 0000-0002-9421-1911
Dieter HoffmannInstitute of Virology, School of Medicine, Technical University of Munich, 81675 Munich, Germany.

Funding

Deutsches Zentrum für Infektionsforschung TTU06.804
6 · The paper itself

Abstract

Human norovirus (HuNoV) is the leading cause of nonbacterial gastroenteritis worldwide with the GII.4 genotype accounting for over 80% of infections. The major capsid protein of GII.4 variants is evolving rapidly, resulting in new epidemic variants with altered antigenic potentials that must be considered for the development of an effective vaccine. In this study, we identify and characterize linear blockade B-cell epitopes in HuNoV GII.4. Five unique linear B-cell epitopes, namely P2A, P2B, P2C, P2D, and P2E, were predicted on the surface-exposed regions of the capsid protein. Evolving of the surface-exposed epitopes over time was found to correlate with the emergence of new GII.4 outbreak variants. Molecular dynamic simulation (MD) analysis and molecular docking revealed that amino acid substitutions in the putative epitopes P2B, P2C, and P2D could be associated with immune escape and the appearance of new GII.4 variants by affecting solvent accessibility and flexibility of the antigenic sites and histo-blood group antigens (HBAG) binding. Testing the synthetic peptides in wild-type mice, epitopes P2B (336-355), P2C (367-384), and P2D (390-400) were recognized as GII.4-specific linear blockade epitopes with the blocking rate of 68, 55 and 28%, respectively. Blocking rate was found to increase to 80% using the pooled serum of epitopes P2B and P2C. These data provide a strategy for expanding the broad blockade potential of vaccines for prevention of NoV infection.

Indexed as

GII.4 genotypelinear blockade epitopemolecular dynamic simulationnorovirus

Identifiers

PMID33466932
PMCPMC7830539

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.